Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00649 ATGGCAGTTTTTGCTCTTGCACTGCTTTTGTTGGCTTTCACTGGCTCTTCAAgtggcacttggtgtgtTTGCAAGGATGGAAGTGATACAATACTGCAGAAGACCTTAGACTATGCTTGTGGAGCAGGGGCTGATTGTAACCCTCTGCATCAAAATGGCCCTTGTTTCCAACCCAACACTGTTAGAGCTCACTGTAACTATGCTGTTAACAGCTATTTCCAAAGGAAGGGCCAGGCTCAAGGGTCCTGTGACTTTGCAGGAACCGCCACTGTTACTGCATCAGATCCCAGTACCGCAGGTTGTTCTTACCCTGCAAGTGCCAGCACTGCAGGCACTGGGACAACCACATCTTCCACTGGCACCACTTCCTCTCCATACAGTTCCACACCAGGAGTGTTAGGAGGGATTGGCAGTGGCATGGGCCCTTCTGGAGTTGGCACCAACACAGATGATAGCCATGGTGGGCATACACTTTTGGACACTTCTTTGTTGACCCTCTTTTCAGGCTTGGTGATGGTCCTGTGGTGGGCCTGA 534 0.4906 MAVFALALLLLAFTGSSSGTWCVCKDGSDTILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQRKGQAQGSCDFAGTATVTASDPSTAGCSYPASASTAGTGTTTSSTGTTSSPYSSTPGVLGGIGSGMGPSGVGTNTDDSHGGHTLLDTSLLTLFSGLVMVLWWA 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00649 177 SMART X8_cls 20 103 IPR012946 -
Cca03g00649 177 Pfam X8 domain 20 90 IPR012946 -
Cca03g00649 177 MobiDBLite consensus disorder prediction 107 152 - -
Cca03g00649 177 MobiDBLite consensus disorder prediction 107 131 - -
Cca03g00649 177 Gene3D - 16 121 - -
Cca03g00649 177 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 167 - -
Cca03g00649 177 PANTHER BETA-1,3 GLUCANASE 1 167 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00649 Cca-Chr3 11589767 11597041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00649 21 117 Miscellaneous Gene Families AT2G16230 42.857 2.35e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00649 - - gmx:100812033 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00649 03 11589767 11597041 Cca11g02011 11 45580177 45583431 ECH
Cca03g00649 03 11589767 11597041 Cca03g00649 03 11589767 11597041 ECH