Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01981 ATGGAAGTTTCATGCAAGATTCTCAGAAGATCAACTCACAGTTTCCTCCAAAACTATCATTACTTCACCTCAACACCAGCTTTTCTTGCTTTTCCTTTCTCAGCTTCAATACTCCTCTCTCAAGCATTTGTCCCTTCACCTTCATCCCTTTTGCCTCAAATCTACAACCGCCTAAGGACTCTCTTTGATGCTGCAGGCTTCCCTTCTTCAAAATTGTTTACAATTCTCAACTTGAAGGTTTCTCAAACAATCACTTcttcaatcttcacccttcctttcaccctcacctttctccTAATTGCAAAAGCATCCATAATTCATGCTCTCAACCACCACAAACCATCTTTGCCACCTTCCTTCAATTCAATGAAGTCCCTTTACAAGCCTCTCCTCCACACCTACATCTTCAACTGTTTCTTGATTCTCTCAGCAAATGCAACTGCTTTTGGATTCATGTTTTTGGCCTTCAGCTTCATTGAAAAACTTGGCTACTACTATTCCCCTAGTAGCCTCATCCTCTTCACGTCAGTATCTGGGGCAATTCTCTTCTCTGTGATTCTTGCCAATGCTCTTGTCACATGCAACATGGCACTGGCTCTATCTGGCATGGAGGGACATGGTGGATACTTGGCAATTCTGAAAGCTTGTTTTCTCTTAAGGGGAAGAACATCAATGGCCTTGTTCCTGGCACTTCCTGTCAATGTGGCTTTGGCTGCCATTGAGGCCTTGTTCCAATTCCGGGTTGTGAGGCCTTATCATATCGCTGGAATAGCAAGGCCTTGTGTGGCTTTGGAGGGGATTTTCATTGCTTATCTCTACTCAATCTTCATCATCCTTGACACAATTGTGAGCTGCATGTTCTACAAAAGCCTTAAGATAGGATCATGGATCGGTCAAGCGGACAAACATTTGTTCAGAATTGAATACCCTGATGAAGACAAGTACGGTTACATGGGCACTAAGGAACTACCATAA 975 0.4123 MEVSCKILRRSTHSFLQNYHYFTSTPAFLAFPFSASILLSQAFVPSPSSLLPQIYNRLRTLFDAAGFPSSKLFTILNLKVSQTITSSIFTLPFTLTFLLIAKASIIHALNHHKPSLPPSFNSMKSLYKPLLHTYIFNCFLILSANATAFGFMFLAFSFIEKLGYYYSPSSLILFTSVSGAILFSVILANALVTCNMALALSGMEGHGGYLAILKACFLLRGRTSMALFLALPVNVALAAIEALFQFRVVRPYHIAGIARPCVALEGIFIAYLYSIFIILDTIVSCMFYKSLKIGSWIGQADKHLFRIEYPDEDKYGYMGTKELP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01981 324 PANTHER PROTEIN, PUTATIVE-RELATED 4 322 - -
Cca11g01981 324 PANTHER OS08G0107100 PROTEIN-RELATED 4 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01981 Cca-Chr11 45206428 45208102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01981 - - gmx:100819933 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00616 03 10708884 10710524 Cca11g01981 11 45206428 45208102 ECH
Cca11g01981 11 45206428 45208102 Cca11g01981 11 45206428 45208102 ECH