Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00616 ATGGAAGTTTCGTGCAAAATTTTGAGGAGATCAATCCACAGTTTTCTTCAAAACTACCATTATTTCACCTCAACTGCAGCTTTTCTTGCCCTTCCTTTCTCAGCATCAATACTCCTATCACAAGCTTTAGTTCCAAACTCTTCATCCCTCTTGCCTCACATACACAGTCACCTAAGGACTCTCTTTGATGCTGCAGGCTTTCCTTCCTCATCACAATTGTTTAGCATTCTCAACCTCAAGGTCTCTCAAACCATCACTTCCTCGATCTTCACCCTTCCCTTCACTCTCACATTTCTCCTCATTGCAAAAGCATCCATAATTCAAGCTCTAAATCACCACAAACCAACTTTGCCACCTTCCTTCACTTCCATCATATTCCATTACAAGCCTCTCCTCCTCACCTATATCCACAATTCTTTCTTCATCCTCGCAGCAAATGCATCTTGCTTTTGCCTCCTCTTTTTGGCCTTCACCTTTGCTGAAGGGCTAGGGTACTCTTCAGCAAGTTCCACACTTTTGATGTCAGCTGCAGCTGCAGTTCTCTTTTCTGTGATACTTGCCAATGCACTTGTGATTTGCAACATGGCACTGACTCTATCTGGCATGGAGGGACATGGAGGGTACATGGCAATTCTGAAGGCTTGTGTTATGCTAAGGGGAAAGACATCAATGGCTTTGTTCCTAGCACTGCCTGTGAATTTAGGCCTTGCTGCCATTGAGGCCTTGTTCCAGTTCAGGGTTGTAAGAGCCTATCATATTGGTGGAATATCATCATGGCCTTTTATGGCTTTGGAGGGCATTTTCATTGCTTACTTGTACTCAATTTTCATCATCATTGACACAATTGTGAGCTGCATGTTTTACAAAAGCTGCAAGGTTGGATTGTGGAGTGGTCAGGAAGATAAGCATTTCTTGAGAATTGAATTCCCAGAGGAGGACAATTGTGGTTACTTGGTATTCAAGAATTTTGAAGAACTACCTTAA 984 0.4278 MEVSCKILRRSIHSFLQNYHYFTSTAAFLALPFSASILLSQALVPNSSSLLPHIHSHLRTLFDAAGFPSSSQLFSILNLKVSQTITSSIFTLPFTLTFLLIAKASIIQALNHHKPTLPPSFTSIIFHYKPLLLTYIHNSFFILAANASCFCLLFLAFTFAEGLGYSSASSTLLMSAAAAVLFSVILANALVICNMALTLSGMEGHGGYMAILKACVMLRGKTSMALFLALPVNLGLAAIEALFQFRVVRAYHIGGISSWPFMALEGIFIAYLYSIFIIIDTIVSCMFYKSCKVGLWSGQEDKHFLRIEFPEEDNCGYLVFKNFEELP 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00616 327 PANTHER PROTEIN, PUTATIVE-RELATED 4 327 - -
Cca03g00616 327 PANTHER OS08G0107100 PROTEIN-RELATED 4 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00616 Cca-Chr3 10708884 10710524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00616 - - gmx:100797246 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00616 03 10708884 10710524 Cca11g01981 11 45206428 45208102 ECH
Cca03g00616 03 10708884 10710524 Cca03g00616 03 10708884 10710524 ECH