Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01871 ATGGCAGGAGGTGGGGGAGCTCCAGCACCTAAGATTGATGAGCCACAGCCACATCCACCCAAGGATCAGCTTCCAAATGTTTCTTACTGCATTACGAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGCTCGGTACAACTGTGCTAATTCCTACTGCTCTTGTTCCTCAGATGGGAGGTGGCAATGAGGAGAAGGCAAAAGTTATCCAAACACTACTCTTTGTAGCTGGAATTAACACATTGCTGCAAACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATACTTATGTTCCAACAACAATCTCTATTATTCTTGCTGGCCGGTTCAGTGATGAACCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGCCTTTGGCGTAATGTTGCAAGGTTCTTATGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTTTATGAGTTGGGCTTTCCTGGGATTGCTAAATGCATAGAGATTGGACTGCCAGAGCTTATATTGCTAGTATTTGTTTCACAGTTTGTACCCCATGTGCTACATGCAGGAAAACATGTCTTCGACCGTTTCGCTGTTCTATTTACAGTTGCAATTGTATGGCTATATGCTTATCTGCTCACTGTTGGAGGGGCCTACAACCATGCTGCACCTAAAACACAGTCAACCTGCCGCACTGATCGTGCTGGTTTAATAGAAGCTGCCCCATGGATACGAGTTCCATATCCATTTCAATGGGGAGCACCTTCATTTGACGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGGTTATATTGCTGTTTATCGGTATGCAAGTGCCACACCATTACCGCCATCTATTCTTAGTCGTGGCATCGGTTGGCAGGGAGTTGCCATTCTGTTATCAGGATTGTTTGGAACTGGCAATGGATCCTCTGTATCTATAGAAAATGCTGGTCTTTTGGCTTTGACTCGTGTTGGCAGTCGAAGAGTTGTGCAAATATCTGCTGGTTTTATGATTTTCTTTTCAATTCTCGGGAAATTTGGAGCTGTTTTTGCCTCCATTCCACCTCCTATTGTTGCGGCACTGTACTGCTTGTTCTTTGCTTATGTTGGAGCTGGGGGTCTAAGTTTTCTTCAATTCTGCAACCTCAACAGTTTTAGAACAAAGTTTGTTCTAGGCTTCTCAATCTTCTTGGGCTTGTCTGTGTCACAGTACTTCAATGAGTACACAGCAATTAATGGTTTTGGTCCAGTTCACACAGGAGCAAGATGGTTCAATGATATAATCAACGTCCCATTCCAATCAAAAGCATTTGTTGCTGGTTGTGTGGCATATTTCTTGGACAACACACTACATAAGAAGGAAGGTGCTATTCGGAAAGACAGAGGAAAACATTGGTGGGACAAGTACCGATCCTTCAAGACTGACACAAGAAGTGAGGAGTTTTATTCACTGCCTTTCAACCTAAACAAATACTTCCCATCTGTGTAA 1602 0.4376 MAGGGGAPAPKIDEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVPTTISIILAGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLCPLSAVPLVSLVGFGLYELGFPGIAKCIEIGLPELILLVFVSQFVPHVLHAGKHVFDRFAVLFTVAIVWLYAYLLTVGGAYNHAAPKTQSTCRTDRAGLIEAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGGYIAVYRYASATPLPPSILSRGIGWQGVAILLSGLFGTGNGSSVSIENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFLGLSVSQYFNEYTAINGFGPVHTGARWFNDIINVPFQSKAFVAGCVAYFLDNTLHKKEGAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01871 533 MobiDBLite consensus disorder prediction 1 27 - -
Cca11g01871 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 533 - -
Cca11g01871 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cca11g01871 533 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 2 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01871 Cca-Chr11 43885385 43893190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01871 9 533 Organic Solute Cotransporters AT5G49990 81.179 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01871 - - gmx:100791553 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01871 11 43885385 43893190 Cca11g01871 11 43885385 43893190 ECH
Cca11g01871 11 43885385 43893190 Cca03g00502 03 8274596 8281092 PCT