Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00502 ATGGCAGGAGGAGGAGGTCCACCCAAAGCAGATGAGCCACAGCCACACCCAGCAAAGGATCAGCTTCCCAATATTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTCGGTTTTCAACATTTTCTTGTGATGCTCGGCACAACTGTGCTCATTCCCACCGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAGGCAAGAGTTATCGAAACACTGCTTTTTGTTGCTGGTATTAACACATTATTGCAAACACTGTTTGGAACTCGACTGCCTGCAGTAATTGGGGGGTCCTACACCTTTGTTCCAACCACAATCTCAATTATCCTTGCTGGCCGATTCAGTGGTGAACCAGATCCTATAGAGAAATTTAAAAGGATAATGAGGGCAATCCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTACTGGGCTTCAGTGGTCTCTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCGTCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGGTTCCCTGGGGTTGCTAAATGTGTAGAGATCGGACTTCCTGAGCTTATATTGCTTGTATTTGTTTCACAGTATGTGCCCCATGTGCTACATTCGGGGAAACATATCTTTGACCGTTTTGCTGTAATATTTACAATTGTAATTGTGTGGATATATGCTCATCTACTTACTGTTGGAGGGGCTTATAATGATGCTGCACCTAAAACTCAGTTATCATGCCGTACTGATCGTGCTGGACTTATAGATGCTGCTCCTTGGATAAGAATTCCGTATCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTATATAGGTATGCAAGTGCAACACCATTACCGCCATCTATTCTTAGTCGGGGTATCGGTTGGCAGGGAGTTGGCATTTTGTTATCAGGATTGTTTGGAACAGTCAATGGGTCCTCTGTGTCAGTAGAAAATGCAGGTCTTCTGGCTTTGACACGTGTTGGAAGCAGAAGAGTAGTGCAAATATCTGCTGGATTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTTTTTGCCTCCATCCCGCCTCCCATTATTGCTGCCCTGTATTGCTTGTTCTTTGCTTATGTTGGTGCTGGTGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAATTCATTTTAGGCTTCTCAATCTTCTTGGGCTTGTCTGTGCCTCAGTACTTCAATGAGTACACAGCAATCAATGGTTTTGGTCCAGTCCACACAAGTGCAAGATGGTTCAATGACATAATCAATGTCCCATTCCAATCAAAACCATTTGTTGCGGGTGTTGTGGCATATTTTCTAGACAACACTTTAGACAAGAGAGCTGCTATTAGGAAGGACAGAGGAAAACATTGGTGGGACAAGTACAAGTCCTTCAAGGGTGACAGCAGAAGTGAGGAGTTTTATTCACTGCCTTTCAATCTAAACAAGTACTTCCCCTCTGTTTAA 1593 0.4375 MAGGGGPPKADEPQPHPAKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNEEKARVIETLLFVAGINTLLQTLFGTRLPAVIGGSYTFVPTTISIILAGRFSGEPDPIEKFKRIMRAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSSVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFVSQYVPHVLHSGKHIFDRFAVIFTIVIVWIYAHLLTVGGAYNDAAPKTQLSCRTDRAGLIDAAPWIRIPYPFQWGAPSFDAGEAFAMMMAAFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSVPQYFNEYTAINGFGPVHTSARWFNDIINVPFQSKPFVAGVVAYFLDNTLDKRAAIRKDRGKHWWDKYKSFKGDSRSEEFYSLPFNLNKYFPSV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00502 530 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 530 - -
Cca03g00502 530 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 530 - -
Cca03g00502 530 MobiDBLite consensus disorder prediction 1 23 - -
Cca03g00502 530 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00502 Cca-Chr3 8274596 8281092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00502 7 530 Organic Solute Cotransporters AT1G60030 76.952 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00502 - - gmx:100785624 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00502 03 8274596 8281092 Cca03g00502 03 8274596 8281092 ECH
Cca11g01871 11 43885385 43893190 Cca03g00502 03 8274596 8281092 PCT