Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01862 ATGTCCATCGAGCTTGATTCTGAATCCGTTCCCACTCCCACCTCCCAAGCCCAAGAGAGATCCAACTCTCGGTGCGCCTTGTTATTGCCGTGCTGCTTCGGCCCACGACGTCGTTCCTCATGGTGGGAGCTGGTCCGCTCCAACTCCAATTCAGGTCCAAGTGGAGAGCGGTGGTGGTCGCGGGGGCTTCGGGCTCTTAAGAAGATTCGCGAGTGGTCGGAGATCGTGGCAGGTCCCAGGTGGAAAACGTTCATTCGCAGGTTcaaccgcaaccgcaaccgcgcctccaactccaactccaagcgcaCGCCCAAGTACCAGTATGATCCCTTGAGTTACGCCCTAAACTTCGACGAGGGGCATAACGGGGACTTCAACGACGAAGCCACCTTCCGCAATTTCTCCACCCGCTATGCTGCCGTCAACGTCAAGTCGCTTTCCCCTAAGGCTCGTGACATCGATGATGTCGTTTTGGTCTGA 480 0.5125 MSIELDSESVPTPTSQAQERSNSRCALLLPCCFGPRRRSSWWELVRSNSNSGPSGERWWSRGLRALKKIREWSEIVAGPRWKTFIRRFNRNRNRASNSNSKRTPKYQYDPLSYALNFDEGHNGDFNDEATFRNFSTRYAAVNVKSLSPKARDIDDVVLV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01862 159 PANTHER - 1 159 - -
Cca11g01862 159 PANTHER STRESS INDUCED PROTEIN-RELATED 1 159 - -
Cca11g01862 159 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01862 Cca-Chr11 43788868 43791283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01862 - - pvu:PHAVU_003G198600g 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00494 03 8057693 8058374 Cca11g01862 11 43788868 43791283 ECH
Cca11g01862 11 43788868 43791283 Cca11g01862 11 43788868 43791283 ECH