Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00494 ATGTCCAACTCCGAACACATAGAGCCAGATACAACCGGCAGCGGGGAAGACCGGTCCAACTCCCGCCTAGCCAACACGCGCTGCACCTTCTGCTTCCCCTGCTGCTTCGGTTCCCGTCACTCCGTGGACTTCGCATGGTGGGAGCGCGTGCAGGCGCAACCGCCCACCGAAAGCCCCGGTGGCCGGTTATGGTCGCGCGGAGTGATGGCCTTCATGAAAGTGCGGGAGTGGTCGGAGCTGGCGGCGGGGCCGCGGTGGAAGACTTTCATACGGCGGTTCAACCGGAGCAGAAGCGGCAGCAATCGCCATGCACCGGGGAAGTACCAGTACGACCCCTTGAGTTACGCCTTGAACTTCGACGAGGGGCATAACGGGGAATTTGACGATGACAGTTTTAGCCCGTTACGGAATTTCTCCACTCGTTACGCCACGCCACCTCCTTTCAAGTCCGTTTCCGCAGATTCCAATCAGGACGTCGTCGTTTCGGGCTAA 492 0.6016 MSNSEHIEPDTTGSGEDRSNSRLANTRCTFCFPCCFGSRHSVDFAWWERVQAQPPTESPGGRLWSRGVMAFMKVREWSELAAGPRWKTFIRRFNRSRSGSNRHAPGKYQYDPLSYALNFDEGHNGEFDDDSFSPLRNFSTRYATPPPFKSVSADSNQDVVVSG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00494 163 MobiDBLite consensus disorder prediction 142 163 - -
Cca03g00494 163 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g00494 163 PANTHER BNAA06G16930D PROTEIN 6 162 - -
Cca03g00494 163 PANTHER NHL DOMAIN PROTEIN 6 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00494 Cca-Chr3 8057693 8058374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00494 - - ccaj:109819329 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00494 03 8057693 8058374 Cca11g01862 11 43788868 43791283 ECH
Cca03g00494 03 8057693 8058374 Cca03g00494 03 8057693 8058374 ECH