Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01812 ATGGCGCCAAGCCTAACCACAGTGCAAGAAACGGCTCCTCCCAACGCCAATCCCCACTTATCCATAAAACTCGAATCCTCAACGTTCCTCGCAAGCGGCCACCCAATCCTCACCCAAGTCCCACCCAACATAACAACCTCCCACCCCCACCTCCACCCCCACGGCTGCTTCCTCGGTTTCACCGCCGCCGAGGCCCGAAGCCGCCACGTGGCCTCCATCGGCAAGCTTGGCGGCATCAGGTTCACCAGCATCTTCCGCTTCAAGCTGTGGTGGAGCACCCACTGGTCCGGTAGCAACGGCCGAGACGTGGAGCACGAAACCCAAATGATGATCCTCCAGAACGACGCCGTGAGGGGACGCCCCTACGTCCTCCTCTTGCCCCTCCTCGAGGGACCCTTCCGAGGCTCCCTCCAAGCGGGCCTCGACGACCACGTGGACGTCTGCATGGAGAGCGGATCCAGACGTGTGACGGAGGGTTCCTTCGGAAGCTGCTTGTACATGCACGTGCACCACGACCCCTTTACTCTAATCGAGGAAGCGGTGAGGGTGGTGAAGGCCCATCTGGGAACCTTTACTTTGATGGAGGACAAGACCCCGCCGGGGATAGTTGACAAGTTCGGGTGGTGCACCTGGGACGCCTTTTACCTAAAGGTGGATCCCTCAGGGGTGCGGGAAGGGGTGAAGGGTTTGGTGGAGGGAGGGTGTCCTCCAGGGTTGGTGATCATCGACGACGGGTGGCAAACGTTTTGCGGTGACGATGAAACGGTGACGGACGGTGGAAGCTTGGAGTGTTCCGTTCCGGGGGAGCAGATGGTGAAGAGGTTGGTGAGGTTTGAGGATAATAGTAAGTTTAAGGAGTACAGGGGGTGTGATGGGAGCAATGGGATGGGTGCGTTTGTGAGGGACTTGAAGGGGGAGTTTAGTGGGCTGGACTATGTCTATGTTTGGCATGCCTTTTCTGGCTACTGGGGTGGGCTTAGGCCCAATGTGCCCGGGATGCCGGAGGCCACGGTGGTTGCGACTAAGTTGTCTCCCGGGGCGGAGATGACTATGACGGATCTAGCGGTGGTGAAGATAATGGAGATTGGCGTGGGATTGGTGCCACCCCATCAGCTCTACCAGGGACTCCACTCTCACTTGGAATCCCTCGGTGTTGACGGTGTCAAGATTGATGTCACGCAGATTCTTGAGATGGTATCAGAGGATTATGGTGGTCGTGTTGAAATGGCCAAAGCATATTACAAAGCACTCACTGCTTCCGTGAAGAAGCATTTCAAAGGCAATGGTGTCATTTCAAGCATGCAGCAGTGCAATGATTTCATGTTCCTTGGTACGGAAACCATATCACTTGGACGAGTGGGTGATGATTTTTGGTGCACTGACCCAGCTGGAGATCCAAACGGTGCCTATTGGCTGCAAGGGTGTCATATGGTGCACTGTGCTTACAACAGCTTGTGGATGGGAAATTTCATACACCCAGATTGGGACATGTTCCAATCTGATCATGCTTGTGCCGAATTTCACGCTGCTTCCAGGGCCATTTCTGGTGGACCAATTTACGTAAGCGACTCTGTTGGAAAACACAACTTCAAGTTGCTTAAGAAGCTCGTTCTACCTGATGCCTCCATTTTGCGCTGTCAACATTATGCACTTCCAACCCGAGACTGCTTATTTCTGGACCCTTTGCATGACGGCAAAACAATGCTCAAAATTTGGAACCTCAATAAATGTTCCGGGGTTTTGGGTCTGTTCAATTGCCAAGGAGGAGGGTGGTGCCCTGTTGCTAGGCGAAACAAGAGTGCCTCTGAGTTTTCACACTCTGTGACTTGCTTTGCAAGTCCCCAAGACATTGAGTGGAGCAAAGGGAAGCACCCAATTTGCATCAAAGGGGTAGATGAATTTGCTGTGTACATGCTTAAGGATGACACGTTGAAGCTCCTCAAGTACACAGAAAGTGTACAAGTTTCACTTGAGCCTTTTAGTTTTGAGCTTTTGACAGTTTCTCCAGTGATGGTCTTGCCCAGAAAATCCATCCAATTTGCTCCAATTGGATTGGTGAGCATGCTCAACTCTGGGGGATCAATTCTGTCAATAGAATATGATACACATGAAAATTTGGCAAGAATTGAGGTGAGAGGACATGGGGAAATGAGGGTATATGCATCAGAGAAGCCAGAGTGTTGTAAGATTGATGGAGAGCATGTGGAATTTGATTACGTTGATAACACAGTGAGGCTCCAAGTGTCGTGGCCTAGTTCTTCAAGGTTGTCCGTGGTCGAGTATTTGTTCTGA 2292 0.5205 MAPSLTTVQETAPPNANPHLSIKLESSTFLASGHPILTQVPPNITTSHPHLHPHGCFLGFTAAEARSRHVASIGKLGGIRFTSIFRFKLWWSTHWSGSNGRDVEHETQMMILQNDAVRGRPYVLLLPLLEGPFRGSLQAGLDDHVDVCMESGSRRVTEGSFGSCLYMHVHHDPFTLIEEAVRVVKAHLGTFTLMEDKTPPGIVDKFGWCTWDAFYLKVDPSGVREGVKGLVEGGCPPGLVIIDDGWQTFCGDDETVTDGGSLECSVPGEQMVKRLVRFEDNSKFKEYRGCDGSNGMGAFVRDLKGEFSGLDYVYVWHAFSGYWGGLRPNVPGMPEATVVATKLSPGAEMTMTDLAVVKIMEIGVGLVPPHQLYQGLHSHLESLGVDGVKIDVTQILEMVSEDYGGRVEMAKAYYKALTASVKKHFKGNGVISSMQQCNDFMFLGTETISLGRVGDDFWCTDPAGDPNGAYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSDHACAEFHAASRAISGGPIYVSDSVGKHNFKLLKKLVLPDASILRCQHYALPTRDCLFLDPLHDGKTMLKIWNLNKCSGVLGLFNCQGGGWCPVARRNKSASEFSHSVTCFASPQDIEWSKGKHPICIKGVDEFAVYMLKDDTLKLLKYTESVQVSLEPFSFELLTVSPVMVLPRKSIQFAPIGLVSMLNSGGSILSIEYDTHENLARIEVRGHGEMRVYASEKPECCKIDGEHVEFDYVDNTVRLQVSWPSSSRLSVVEYLF 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01812 763 Gene3D Aldolase class I 201 537 IPR013785 -
Cca11g01812 763 PANTHER - 1 763 IPR008811 -
Cca11g01812 763 SUPERFAMILY (Trans)glycosidases 200 546 IPR017853 -
Cca11g01812 763 Pfam Raffinose synthase or seed imbibition protein Sip1 25 746 IPR008811 -
Cca11g01812 763 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 1 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01812 Cca-Chr11 43060606 43064876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01812 22 763 Glycoside Hydrolase AT5G40390 60.131 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01812 K06617 - gmx:100798883 1358.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00434 03 6828058 6833770 Cca11g01812 11 43060606 43064876 ECH
Cca11g01812 11 43060606 43064876 Cca11g01812 11 43060606 43064876 ECH