Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01785 ATGCGATCTTCCTTCCCACTTCCAATCTCAACATCCTACTGTCTCTTTCGTTTTCTTGTTTCCATCACAACAAGAGCTTGTGGAGAGTCATTTCTTGGTGTTCCACGGTACTATAGGCATAGCATTCTTGTGTTACAGAGAGCAGTAAAAGAATGGAATAATAATCAGAGGCACAAATTTGTGATAAATTTCGGAGATATTGTAGATGGCTATTGTCCAAAAGATCAATCTCTTAACACTGTAAAGAAAGTTGTGGATGAATTTCAGAAGTTCAAAGGGCCAGTGTATCATTTGATTGGCAATCACTGCCTATACAATCTGCCTCGAAATAAGTTACTTCCATTACTAAAGATCCAGAATCCTGTAGGGCATGCTTACTATGATTTTTCACCGGTGCCTGAATATAGATTTGTAGTTCTTGATGGCTATGACATAAGTGCAATTGGCTGGCCTCAAGATCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAGAAGAATCCAAATGAAGACAAGAACAGTCCAACAGGGTTGGTGGGCCTTGAAAGAAGGTTCCTTATGTTCAATGGAGCTGTTGGAAAGGAACAAATGGAATGGTTGAATGGTGTTCTTCAGGAAGCAACAAAAATGAAACAGAAGGTGGTAATCTGTTGCCATCTGCCTCTAGATCTTGGGGCCTCATCTAAGGAGGCACTGTTATGGAATTATGACGAAGTAATGAATTTGTTACACAGATACACTTGTGTGAAGCTCTGTCTATCTGGACATGATCACAAAGGTGGATACTCAATTGATTCCCATGGAGTTCACCACAGAGTTCTTGAAGCTGCCCTGGAGTGTCCTTTTGGCACGGATGCATTTGGATATGTTGATGTTTATGATGATAGAATATCACTTTATGGTACGGACAGAATGCAGAGTACAGACATGTATTTTCATCCTAAAGCAGATTTATGA 960 0.4031 MRSSFPLPISTSYCLFRFLVSITTRACGESFLGVPRYYRHSILVLQRAVKEWNNNQRHKFVINFGDIVDGYCPKDQSLNTVKKVVDEFQKFKGPVYHLIGNHCLYNLPRNKLLPLLKIQNPVGHAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKTLEALKFLREKNPNEDKNSPTGLVGLERRFLMFNGAVGKEQMEWLNGVLQEATKMKQKVVICCHLPLDLGASSKEALLWNYDEVMNLLHRYTCVKLCLSGHDHKGGYSIDSHGVHHRVLEAALECPFGTDAFGYVDVYDDRISLYGTDRMQSTDMYFHPKADL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01785 319 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 25 316 - -
Cca11g01785 319 Gene3D - 27 306 IPR029052 -
Cca11g01785 319 CDD MPP_Nbla03831 28 300 IPR041869 -
Cca11g01785 319 PANTHER - 25 316 - -
Cca11g01785 319 SUPERFAMILY Metallo-dependent phosphatases 33 309 IPR029052 -
Cca11g01785 319 Pfam Calcineurin-like phosphoesterase 51 260 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01785 Cca-Chr11 42713009 42715648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01785 K01517 - gmx:100780293 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01785 11 42713009 42715648 Cca11g01785 11 42713009 42715648 ECH
Cca03g00406 03 6323639 6326348 Cca11g01785 11 42713009 42715648 PCT