Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01741 ATGGATGGAAGAGGAGGCTGCTGCATCGCCAGGTACGTTCCCGGTGTCGACAAAATAATGCTCAGGTTCCGCCCCATCGCTCCCAAACCCGTCGCCGGACCCACCGCTTCCGACGCCTCTTCGTCGGAAAGCGGCGACGCCTTCCTCAAGAGCACTACCCCCAAGAGAAAGTACGTAAGGGATAATAACAAACGTGGAACCCGCCGTAGGAAGAACAACGTGAACACATCCACGCCGGTTGTGACTCTTCCTTTGCTCCCGGAAACTCCCGATCCGAAGGTTTCTCCGGCGAGGGATCTATCTCGCCCTGCAGCCGACGAAGAAGGGAAGAAGAAGTTGAATATGAAGGTGGCGGTGTGGCCGGGTTTGGAGAAGAGAAGCATGACGATGACGAAGGCGGAACCCTACGGCGCGATGGGAGGGCGGTGCTCGTGCGTGACGGTGGAGTGCGTGACGGAGACGTGGGTGGAGGGCGAGTGGCTGGGGAGTACGGACGAGGAGCGGAGAGCGAAGCTGAGCAGGGACACGTGTCCGGGGTTCATATCGGACGGTTACGGGAGGGTGACGTGGACGAACGAGGCTTACGGAGAGATGATGAagggcgagggggaggggcaggggcaggggcgagTGTTGCTGGTGATGAAGGTGAGTGCAGTGGTGGCGCACCCTTCGTTCACGTGCAGGGTTAGGGTGGTGCAGTACACGTGTGGGAGAGAGAGAAGCTCGCTCACCGTGCCCTGCGATGTTTGGAGAATGGACTCTGGCGGCTTTGCATGGAGGTTGGACGTTAAAACCGCGCTTAGCTTGAGATTCGGTTACTAA 825 0.5612 MDGRGGCCIARYVPGVDKIMLRFRPIAPKPVAGPTASDASSSESGDAFLKSTTPKRKYVRDNNKRGTRRRKNNVNTSTPVVTLPLLPETPDPKVSPARDLSRPAADEEGKKKLNMKVAVWPGLEKRSMTMTKAEPYGAMGGRCSCVTVECVTETWVEGEWLGSTDEERRAKLSRDTCPGFISDGYGRVTWTNEAYGEMMKGEGEGQGQGRVLLVMKVSAVVAHPSFTCRVRVVQYTCGRERSSLTVPCDVWRMDSGGFAWRLDVKTALSLRFGY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01741 274 MobiDBLite consensus disorder prediction 35 49 - -
Cca11g01741 274 PANTHER VON WILLEBRAND FACTOR A DOMAIN PROTEIN 1 270 - -
Cca11g01741 274 MobiDBLite consensus disorder prediction 29 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01741 Cca-Chr11 42012184 42014395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01741 - - gmx:100812834 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00356 03 5463325 5464071 Cca11g01741 11 42012184 42014395 ECH
Cca11g01741 11 42012184 42014395 Cca11g01741 11 42012184 42014395 ECH
Cca11g01741 11 42012184 42014395 Cca03g00356 03 5463325 5464071 PCT