Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00356 ATGGAAACCAATGGAGGTTGCTGCATCGCCAAGCGCGCTCACCACATGTCCAAGGTTCACACCATAATGCTACGCTACCGTCCCATCGCTCCCAAGCCTCTCCccgccgccgccaccgccgacgtccacgccTTCTCCAGATCCAAACCAAAGCAAGCCAAGCAGCGCACCAGCCGAGGAATCCGCCGCCGGAGAAACGCGCCTCCTCCTCCGGCGCCGGTGCCGGCGGTGACTCTCCCGCTCCTCCCGGAGACTCCAGATCCGAAGAAAACCACCGAGGAGGCAAAGAGGAAAAGCCTCCCGGTGTGGCTTAACTTCGAGAACCGCGCTTGGGAGAAGCCGGATCGTTGCTGGTACGGGACAGTGGTGACGGTGGAGTGCGTGACGGACACGTGGCAGCAGCAGGAGGAGGAGGAGTTAGGGTTAGGGTTAGGGAAGAGCGACGAGGAACGGAGAGCGAAGCTGGAGGAGGACACGTGTCCGGGGTTTATATCGGACGGTTACGGGAGCGTGACGTGGACGAATGGTGCGTACCGGGAGACGGTCGGCGGTGGAGGAGTATGGCTTGCGATGAAGGCGAGCGTAGCATATCCGTACGGAGGGTTCACGTGTAGGGTGCGGGTGCAGTACGCGTGTGGGAAAGAGAGAACCGTGCCATGTGATGCGTGGAGAATGGACTCTGGTGGCTTCGCTTGGAGATTAGACGTTAAAGCTGCTCTTACCTTGAGCTTAGGCTTAGCTCTCTAA 747 0.5703 METNGGCCIAKRAHHMSKVHTIMLRYRPIAPKPLPAAATADVHAFSRSKPKQAKQRTSRGIRRRRNAPPPPAPVPAVTLPLLPETPDPKKTTEEAKRKSLPVWLNFENRAWEKPDRCWYGTVVTVECVTDTWQQQEEEELGLGLGKSDEERRAKLEEDTCPGFISDGYGSVTWTNGAYRETVGGGGVWLAMKASVAYPYGGFTCRVRVQYACGKERTVPCDAWRMDSGGFAWRLDVKAALTLSLGLAL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00356 248 MobiDBLite consensus disorder prediction 66 82 - -
Cca03g00356 248 MobiDBLite consensus disorder prediction 40 96 - -
Cca03g00356 248 PANTHER VON WILLEBRAND FACTOR A DOMAIN PROTEIN 1 242 - -
Cca03g00356 248 MobiDBLite consensus disorder prediction 49 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00356 Cca-Chr3 5463325 5464071 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00356 - - ccaj:109795676 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00356 03 5463325 5464071 Cca11g01741 11 42012184 42014395 ECH
Cca03g00356 03 5463325 5464071 Cca03g00356 03 5463325 5464071 ECH
Cca11g01741 11 42012184 42014395 Cca03g00356 03 5463325 5464071 PCT