Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01710 ATGGGAACAAACAGTGAGGAGCATGGAGGATCTGGGGTAACATATCAGGAAATGGGAGAAGATGAAGTGAAGGACATTCGAAATGTTCCAGTAGGACCTATACACAAATTAATAGCAGAGAATACCAAGTCGAACAGTATGGTTATAAAGAAACCACATGTGGTGATTCCTCCTCATATCATAGCAGAAGCCATATCAACGATCCGTGATATTGACATTAGATGGTCAGGTCCAATAACACAGAAAGAAATGGAATATGTTGAACAGTATGTACTTGCAAAGTACCCTGAATATGCAGGCCTAATTGAAGGAGATGGGAATGGCATAGACTTGTCTAGCTTTATTATCAATGAGGAGCCTTCAGAACCCTTGTCAGAAGATAGGAAAAAGTCACCAAGAGGGGCCTTTAAAGAACCTTTGTTTGGCAATAATCTCCCTGAAATGGATAGGACCCAGTTGGAGCCATCAAGACTACTAGACATTCTCAACAAAAAATCCTCCTTTCCAGGAAGTTTCATCTCAATCCCAGAAATCCAAGCCCAAAATAAGGTTTTGAAGCATTGTGGGTTGCCTGATAATGATGAATACCTTGTTCTCTTCACTCCAAGTTACAAGGATGCAATGATGTTGGTGGGGGAAAGCTACCCTTTTGTTAAGGGAAACTACTACATGACAATTCTTGGTGAAGAGGAAGACTATATCAGGGAATTTGCTTCTTTTAAGGAGTCCAAGGTGATTGTGGCACCCAAGAGTTGGCTGGATTTGAGGATAAGAGGGTCTCAACTTAGCCAAAATTTTAGGAGGAAGTGTAAGGTGAGCTTGAAGGGCTTATTTGCCTATGCAGCAGATGTGAATGGAACAAACCACTGGATCTCAGAGGCTCATAGAAACTACTGGCATGTTCTGCTTGATGCCTCTGCATTGGTTGTGGGAAAGGACAAGCTGTATCTTGGCCTCCACAGGCCTGACTTCTTAGTCTGTTGTCTTGATAACACTCATTCCAATCCTTCAAGAATCACTTGCCTCTTGGTGAGAAAGAAATCTTTTGACACCTCCACTGCTTCGTCTCAGGTCAATGGATGA 1083 0.4229 MGTNSEEHGGSGVTYQEMGEDEVKDIRNVPVGPIHKLIAENTKSNSMVIKKPHVVIPPHIIAEAISTIRDIDIRWSGPITQKEMEYVEQYVLAKYPEYAGLIEGDGNGIDLSSFIINEEPSEPLSEDRKKSPRGAFKEPLFGNNLPEMDRTQLEPSRLLDILNKKSSFPGSFISIPEIQAQNKVLKHCGLPDNDEYLVLFTPSYKDAMMLVGESYPFVKGNYYMTILGEEEDYIREFASFKESKVIVAPKSWLDLRIRGSQLSQNFRRKCKVSLKGLFAYAADVNGTNHWISEAHRNYWHVLLDASALVVGKDKLYLGLHRPDFLVCCLDNTHSNPSRITCLLVRKKSFDTSTASSQVNG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01710 360 MobiDBLite consensus disorder prediction 121 135 - -
Cca11g01710 360 PANTHER - 7 360 - -
Cca11g01710 360 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 7 360 - -
Cca11g01710 360 MobiDBLite consensus disorder prediction 120 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01710 Cca-Chr11 41518295 41520572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01710 - - gmx:100793062 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00327 03 5110660 5113000 Cca11g01710 11 41518295 41520572 ECH
Cca11g01710 11 41518295 41520572 Cca11g01710 11 41518295 41520572 ECH