Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00327 ATGGGGACTAATAGGCAGGAGCATGAAATTTCAGACGGAGGATCTGAGGTAACATATCATGAGATGGTAGAAAATGAAATCACAGACACTCACAAAGTTCCAACACACAAATTAATAAGTGAGAGCTGCAAATCAAACAGTATGGTTATAAAGAAACGGCATGCATTGATTCCAGCTCATATCATAGCTGAAGCCATATCAACTATCCCTGATCTTGACATTAGATGGTCAGGTCCAATCACACAGAAAGAAATGGAATATGTTGAACAGTATGTCCTAGCAAAGTATCCAGAATATGCAGGCCTCATTGAAGAAGATGGAAATGGGATGATAGACTTGTCTAGCTTTATCATCTATGAGGAGCCTTCAGAGCCCTTGATGGATGAAAGGGGAAAGTCACCAAGAGAGTCTTCTGCATATTTGTTTGGTGCTAACATCCCTGAAATGGATAGGGCCAAGATTCAGTTGGAGCCATCAAGATTGCTAGACATTCTCAACAAGAAATCCTCATTTCCTGGAAGCTTCATCTCTATCCCAGAAATTCAAGCAAGGAACAAGGTTTTGAGGCATTATGGTTTGCCTGATGCTGAGTATTTGGTTCTCTTCACACCAAGCTACAAGGATGCTATGATGTTGGTGGGAGAAAGTTACCCTTTTGTTAAGGGGAACTACTACATGACCATTCTTGATCAGGAAGAGGACTATATCAGGGAATTTGCTTCTTTTAAGGAGTCAAAGGTGATCTCAGCACCCAAGACTTGGTTGGATTTGAGGATCAGTGGATCTCAGCTGAGCCAAAACTTCAGGAGGAGGTGCAAGATCAGTTCAAAAGGCTTGTTCTCTTATCCGGTTGATGCAAATGGAACAATGCATTGGATTTCTGAGGCTCATAGGAACAATTGGCATGTTCTGCTTGATGCATCTGCCTTGGTGGTGGGAAAGGATCGGCCACATCTTCTTGCACTTCACCGGCCGGATTTTGTGATCTGTAGTCTTGACAACACTCACTCAAATCCTTCAAGAATCACTTGCCTCTTGGTGAGAAAGAAATCCTTTGAGATCTCAGCTGCTTCATCTCAGGTAGTCGAATGA 1092 0.4249 MGTNRQEHEISDGGSEVTYHEMVENEITDTHKVPTHKLISESCKSNSMVIKKRHALIPAHIIAEAISTIPDLDIRWSGPITQKEMEYVEQYVLAKYPEYAGLIEEDGNGMIDLSSFIIYEEPSEPLMDERGKSPRESSAYLFGANIPEMDRAKIQLEPSRLLDILNKKSSFPGSFISIPEIQARNKVLRHYGLPDAEYLVLFTPSYKDAMMLVGESYPFVKGNYYMTILDQEEDYIREFASFKESKVISAPKTWLDLRISGSQLSQNFRRRCKISSKGLFSYPVDANGTMHWISEAHRNNWHVLLDASALVVGKDRPHLLALHRPDFVICSLDNTHSNPSRITCLLVRKKSFEISAASSQVVE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00327 363 Gene3D - 179 361 IPR015421 GO:0003824
Cca03g00327 363 PANTHER - 11 362 - -
Cca03g00327 363 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 11 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00327 Cca-Chr3 5110660 5113000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00327 - - vra:106761173 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00327 03 5110660 5113000 Cca11g01710 11 41518295 41520572 ECH
Cca03g00327 03 5110660 5113000 Cca03g00327 03 5110660 5113000 ECH