Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01691 ATGGGCTTCCCAGCCAACGGCGCCTCCGCGGACAGGCCCCTCAAATTCCTGATCTACGGCCGCACGGGCTGGATAGGAGGCATCCTCGGCACCCTCTGCCGGGCCCAGCAGATCCCCTTCGAGTACGGGTCGGGGCGCCTGGAGAACCGGGCCTCCCTGGAGGCCGACATAGCCGCAGTGAAGCCCAGCCACGTGTTGAACGCGGCGGGGGTGACGGGGCGGCCGAACGTGGACTGGTGCGAGTCCCACAAGGTGGAGACCATCCGAACGAACGTGGTGGGAACCCTGACACTGGCCGATGTGTGCCTCCAGAACGAGCTCCTCCTCCTCAACTACGCCACCGGCTGCATCTTCGAGTACGACTCCGCCCACCCCCNNNNNNNNNNNNNNNNNNNCGACGCTCCCAATTTCACGGGCTCCTTCTACTCCAAGACCAAAGCCATGGTAGAGGATCTGCTCCGCAACTACGATAACGTCTGCACCTTGCGTGTCAGGATGCCTATCTCCTCCGATTTATCCAACCCCCGCAATTTCATCACCAAGATTACTCGATACGACAAGGTTGTCAACATTCCCAATTCCATGACCATATTGGACGAGCTTCTTCCCATCTCCATCGAGATGGCCAAGAGGAACCTCACTGGGATCTGGAACTTCACCAACCCTGGAGTCGTCAGTCACAACGAGATTTTGGACATGTACAGAGAATACGTGGATCCCGATTTCACGTGGAGGAACTTCACTCTTGAGGAGCAGGCCAAGGTGATCGTTGCTCCCCGGAGCAACAATGAGCTTGACGCCCACAAGTTGAAGAAGGAATTTCCGGAACTGCTTTCTATCAAGGATTCGCTCATTAAGTATGTCTTCAAGCCCAACCAGAAGGTCAAAGCTTGA 894 0.5582 MGFPANGASADRPLKFLIYGRTGWIGGILGTLCRAQQIPFEYGSGRLENRASLEADIAAVKPSHVLNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCLQNELLLLNYATGCIFEYDSAHPXXXXXXXDAPNFTGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKITRYDKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILDMYREYVDPDFTWRNFTLEEQAKVIVAPRSNNELDAHKLKKEFPELLSIKDSLIKYVFKPNQKVKA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01691 297 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 8 293 - -
Cca11g01691 297 Pfam RmlD substrate binding domain 15 183 IPR029903 -
Cca11g01691 297 Gene3D - 6 297 - -
Cca11g01691 297 PANTHER BNAC05G13120D PROTEIN 8 293 - -
Cca11g01691 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 284 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01691 Cca-Chr11 41215739 41216992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01691 K12451 - gmx:100781643 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01691 11 41215739 41216992 Cca11g01691 11 41215739 41216992 ECH
Cca11g01691 11 41215739 41216992 Cca06g01758 06 32871295 32872445 PCT