Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01758 ATGGGCGCAGAAGCAAATGGCGGCGACAGCCAACTCAAATTTCTGATCTACGGTCGTACCGGTTGGATTGGTGGTTTACTCGGTAAGCTCTGCCAAGAGAGAGGGATCCACTATGAGTACGGAACCGGCAGGCTCGAGAACCGGTTGTCGTTGGAAGCGGACATAACGGAGGTCAAGCCCACCCACGTGTTCAACGCCGCCGGAGTCACCGGTAGACCCAATGTGGACTGGTGTGAATCGCACAAGGTCGAAACCATCCGCACCAACGTCGTCGGAACTCTCACCCTCGCCGACGTCTGCCGCCAGCGCCGCCTCATCCTCATCAACTACGCCACCGGCTGCATCTTCGAGTACGACTCCTCCCACACCCTCGGATCCGGCATCGGATTCAAGGAAGACGACACTCCCAATTTCACCGGATCCTTCTACTCCAAGACCAAAGCCATGGTGGAAGATCTGCTGCGGAACTACGAGAACGTGTGCACGCTGCGCGTGCGGATGCCGATTTCCTCGGATTTGTCGAACCCGCGTAACTTCATAACTAAGATCACTCGATACGACAAGGTTGTCGACATTCCGAACTCGATGACCATATTGGACGAGCTTCTCCCACTTTCTCTGGAGATGGCGAAGAGGAATCTGACTGGGATCTGGAATTTCACGAACCCTGGAGTGGTGAGCCACAACGAGATTCTTCAAATGTACAAGGAATACGTGGATCCAGATTTCACGTGGAACAACTTCACTCTGGAGGAGCAGGCTAAGGTCATTGTTGCGCCCCGAAGCAACAACGAGCTTGACGCTTCCAAGTTGAAGAAGGAGTTTCCTCAGTTATTGTCCATCAAGGACTCCCTCGTTAAGTACGTGTTTCAGCCCAATCGCAAAAACTGA 891 0.5354 MGAEANGGDSQLKFLIYGRTGWIGGLLGKLCQERGIHYEYGTGRLENRLSLEADITEVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRQRRLILINYATGCIFEYDSSHTLGSGIGFKEDDTPNFTGSFYSKTKAMVEDLLRNYENVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMTILDELLPLSLEMAKRNLTGIWNFTNPGVVSHNEILQMYKEYVDPDFTWNNFTLEEQAKVIVAPRSNNELDASKLKKEFPQLLSIKDSLVKYVFQPNRKN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01758 296 Gene3D - 5 296 - -
Cca06g01758 296 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 10 294 - -
Cca06g01758 296 CDD dTDP_HR_like_SDR_e 13 285 - -
Cca06g01758 296 Pfam RmlD substrate binding domain 13 185 IPR029903 -
Cca06g01758 296 PANTHER BNAC05G13120D PROTEIN 10 294 - -
Cca06g01758 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 289 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01758 Cca-Chr6 32871295 32872445 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01758 K12451 - gmx:100787499 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01758 06 32871295 32872445 Cca06g01758 06 32871295 32872445 ECH
Cca11g01691 11 41215739 41216992 Cca06g01758 06 32871295 32872445 PCT