Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01630 ATGAACACTCTCCCTCAAACACCCGCGAAAACCATCCCAGATGCCTGCGACTACAAAGGCCTCCCAGCAGAGAGGTCCAAAACCGGTGGTTGGACTGCAGCCGCCATGATTTTAGGGGTGGAAGCATGTGAGAGGCTAACCACAATGGGAATTGCCGTAAATTTAGTCACATATTTGACGGGTACCATGCATTTGGGCAATGCTTCCTCAGCCAACACAGTCACCAACTTTATGGGAACCTCTTTCATGCTCTGTTTGTTCGGTGGTTTTGTAGCTGACACTTTTATCGGCAGATACCTAACTATTGCCATCTTCGCAACCGTTCAAGCAACTGGTGTTACAATATTGACAATATCAACCATAATCCCAAGCCTACACCCTCCGAAATGCATAAGAGACGCTGCGAAACACTGCGTGCCCGCAAGCAACATGCAGCTAACGGTGCTCTACATAGCTCTCTACACCACAGCGCTTGGCATCGGAGGCTTGAAATCCAGCGTGTCAGGGTTTGGCACGGACCAGTTCGACGAAACGGACAAAGGAGAGAAGAAGCAGATGATAAAATTCTTCAGCTGGTTCGTGTTCTTCATAAGCACAGGGACTCTGACAGCGGTCACGGTTCTTGTGTACATTCAGGATCGCATAGGAAGATACTGGGGTTACGGGATAGGTGTGTGTGCTATTTTGGTGGCTCTTCTTGTGTTTTTAGCAGGTACGAGGAGATACCGGTTCAAGAAACTGGTGGGTAGCCCTCTGACGCAGTTTGCGATGGTGTTTGTGGCGGCGTGGAGGAAGAGACATTTGGAATTGCCGCATGATTCGTCGTTGTTGTTCAACTTGGATGATGTTGCCGATGAAACTATCAGGAAGAAGAAGCAGATGTTGCCACATAGCGAGCAGTTCCGGTGCTTGGACAAGGCAGCAATCAAGGACCCTAAAACCGACGGGGAAGAAATAACGGCGGAGAAAAAATGGTATCTCTCAACCTTAACAGACGTTGAAGAAGTAAAAATGGTGCAGAGAATGGTCCCAGTGTGGGCCACCACCATCATGTTCTGGACAATATACGCCCAAATGACGACATTCTCAGTATCACAAGCGACCACCATGGACCGCCGCATCGGAAAGTCGTTCCAGATCCCCGCCGCCTCCCTGACCGTCTTCTTCGTGGGCAGCGTCCTCCTAACAGTCCCCATCTACGACCGCATCATCGCTCCCATCGCCAGAAAAGCCTCAAACAACCCGCAAGGGCTAACCCCATTGCAACGCATCGGCGTAGGGTTAGTCCTCTCGATCTTCGCAATGGTGGCAGCAGCACTAGTGGAAATAAAGCGGCTGAGAGTGGCGCACGCGCACGGTTTGGCGCATAACCCTCACGCGGTGCTTCCGATGAGCGTCTTCTGGCTGGTGCCGCAGTTCTTCTTCGTGGGGTCCGGTGAGGCGTTTACGTACATAGGGCAGCTAGATTTTTTCCTGAGGGAGTGTCCGAAGGGGATGAAGACCATGAGCACGGGTTTGTTTATGAGCACGTTGTCGTTAGGGTTTTTCCTTAGCTCCTTGTTGGTAACTTTTGTGCACAAAGCAACGCGCCACCGTGAGGCGTGGCTTGCGGATAATCTTAACCAGGGGAAGCTATATTATTTCTACTGGCTTTTGGCTATGTTGAGTTGTTTGAATTTGGTGGTGTACTTGTTTTGTGCTAAGGGCTACGTGTACAAGGACAAGAGGCTCGCTGAGCAGGGCGTGGAGTTGGTGGAACCCGACACTGCAGCTTGCCATGCCTAG 1785 0.5098 MNTLPQTPAKTIPDACDYKGLPAERSKTGGWTAAAMILGVEACERLTTMGIAVNLVTYLTGTMHLGNASSANTVTNFMGTSFMLCLFGGFVADTFIGRYLTIAIFATVQATGVTILTISTIIPSLHPPKCIRDAAKHCVPASNMQLTVLYIALYTTALGIGGLKSSVSGFGTDQFDETDKGEKKQMIKFFSWFVFFISTGTLTAVTVLVYIQDRIGRYWGYGIGVCAILVALLVFLAGTRRYRFKKLVGSPLTQFAMVFVAAWRKRHLELPHDSSLLFNLDDVADETIRKKKQMLPHSEQFRCLDKAAIKDPKTDGEEITAEKKWYLSTLTDVEEVKMVQRMVPVWATTIMFWTIYAQMTTFSVSQATTMDRRIGKSFQIPAASLTVFFVGSVLLTVPIYDRIIAPIARKASNNPQGLTPLQRIGVGLVLSIFAMVAAALVEIKRLRVAHAHGLAHNPHAVLPMSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFMSTLSLGFFLSSLLVTFVHKATRHREAWLADNLNQGKLYYFYWLLAMLSCLNLVVYLFCAKGYVYKDKRLAEQGVELVEPDTAACHA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01630 594 Pfam POT family 99 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca11g01630 594 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Cca11g01630 594 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 585 - -
Cca11g01630 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 585 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca11g01630 594 Gene3D MFS general substrate transporter like domains 6 580 IPR036259 -
Cca11g01630 594 SUPERFAMILY MFS general substrate transporter 19 570 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01630 Cca-Chr11 40096968 40105630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01630 3 593 Organic Solute Cotransporters AT1G12110 62.458 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01630 - - gmx:100800913 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01630 11 40096968 40105630 Cca11g01630 11 40096968 40105630 ECH
Cca06g01707 06 32357226 32361301 Cca11g01630 11 40096968 40105630 PCT