Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01505 ATGCAGTGTTCCAACCGTTTCAAAACCTTAGCAGCTGCAGTGCAACAAAAAATCCATAGGTTGTTGAAGCATTTAGATTTAGATTTCAGATATTGGAAACTCGTCCTTTTGGCAATTTTGGTCTCTGGAGGAGTCGTCTTGCAAATTTTGGCATGTGCATTGTATAATAATTGGTGGCCAATGCTAACTGCGATAACATATGTGCTTCTTCCAATGCCTTTGCTCTTCTTTGCTGGATCTGAACGTTCCTCTTTATTTTCTGAATCAGATAGCAGCTGGGTGAATGCAACCAAGTTCTTAACTGGGGCCTCAGCTGTCGGAAGCATTGCCATTCCAACCATATTAAAGCATTCTGGTGTTATAGGTTGGGGAGCTCTGGCCATGGAACTCTCTTCCTTCTTTGTGTTTGTATTTGCCATAATGTGCTACATACGGATGAATGATGAAGATGATTATAGTACTCTTTGA 468 0.4103 MQCSNRFKTLAAAVQQKIHRLLKHLDLDFRYWKLVLLAILVSGGVVLQILACALYNNWWPMLTAITYVLLPMPLLFFAGSERSSLFSESDSSWVNATKFLTGASAVGSIAIPTILKHSGVIGWGALAMELSSFFVFVFAIMCYIRMNDEDDYSTL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01505 155 Pfam Vacuolar protein sorting 55 34 150 IPR007262 -
Cca11g01505 155 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 29 152 - -
Cca11g01505 155 PANTHER LEPTIN RECEPTOR-RELATED 29 152 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01505 Cca-Chr11 38016973 38018911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01505 33 151 EF-hand Containing Proteins AT1G32410 71.429 6.16e-60 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01505 - - gmx:100775400 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01614 06 31312353 31315094 Cca11g01505 11 38016973 38018911 PCT