Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01614 ATGGCAGACTTACCAGGGCATATACGTGCCTGTTTGAACACAGGGAAGCTTGCCTCCTTGGCAATTTTGGTCTCTGGAGGAATCGTCTTGCAGATTTTGGCATGTGCCTTGTATAATAATTGGTGGCCGATGCTAAGCGTGTTAACGTATGTGCTTCTTCCAATGCCTTTGCTGTTCTTTGCTGGGTCTGATGGTTCTGTATTTTCTGAATCTGATAATAGCTGGGTGAATTTTACCAAGTTCTTGACCGGAGCCTCAACCGTTGGAGGCATTGCCATTCCGAGCATATTAAAGCATGCTGGGGTTATCTGTTGGGGAGCCTTTGCAATGGAACTGTCGTCCTACTTTGTGTTTGGATTATCTGTATTATGTTTCCTTTGGATGAGTGATGATGATGATTACGGTATGCTATGA 414 0.4444 MADLPGHIRACLNTGKLASLAILVSGGIVLQILACALYNNWWPMLSVLTYVLLPMPLLFFAGSDGSVFSESDNSWVNFTKFLTGASTVGGIAIPSILKHAGVICWGAFAMELSSYFVFGLSVLCFLWMSDDDDYGML 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01614 137 Pfam Vacuolar protein sorting 55 18 132 IPR007262 -
Cca06g01614 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
Cca06g01614 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01614 Cca-Chr6 31312353 31315094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01614 1 133 EF-hand Containing Proteins AT1G32410 69.403 6.70e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01614 - - gmx:100500037 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01614 06 31312353 31315094 Cca11g01505 11 38016973 38018911 PCT