Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01500 ATGAAAACAAGGAGAGGAAAACGCTCAGAGGCCTTTTGGCCCTCCCTTGTGATGAAGAAATGGTTAAACATAAAGCCAAAGGTGTATGATTTTAGTGAAGATGAGGTGGACACCGAAACTGAAAGTGAAGATGATGCCTGCTCTCTTAAAGAATCAAGATTGGGTGTGCGTGAAGATAATCATCCACTTAGAACACAATCCATATTCCCAAGTCAAACATCAGATACATTTTGTAAGGGCTATAAGATGAGACATAGAAGAGGGAAATCAGAAACTCTGCGTGTTCAATACATAAATACAAAGGAAGTGAGGGTAACAATTGGCACGTGGAATGTTGCTGGAAGACTTCCATGTAAGGATCTTGATATTGAGGATTGGCTTTGTACCAATGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTAGTCCCCTTGAATGCTGGAAATGTTCTTGGGGCAGAGGATAATACACCTATCCGAAAATGGGAAGCAATCATTAGAAGAACTCTTAACAAATCTTCTGAACTTGAAAGCAAGCACAAAAGCTACAGTGCCCCTACTTCTCCTGTTCTAAGAACTTCTGCTTCTGCAAATGTTCTAGCAGACACTTCAGATGTTAATCCACTAGACACAATGAATGAGGAGTATTTAAGAACTTTTGATAATGATGACCTTGAACAAGAGGAGTTGAAAGACAAAATTGGTAGCATAGGAAAGAACTTACAGTTGAGGAAAATACATGACATTGATCTTCAGACAATACTTGACTGGCCTGAACGTCCATTAGATGCAATCACACATACTGATTCCAGTCCAAAGTTGCGTAGAGTACTAAGCAGCTCGGCCAGAATTGGCTTTAATTGGACAGATAATTCTTCAAAATATGGAGGTGTGATGAAACGGTCACACCATAGTTCTGGAAATTTGGGCTTGTTATTGAAAGAGCAGCAAGTGATGCCTGAAGAAGTAATGGATACCCTTGATGACTTATCTGACATGTTATCGGATGAGGAAGATGATGCTTTCTATGAATTACCAAATGACAAAGAAAATAATGGAGTAGGTAACGTGAAATCACACCGTAAGTATGTCCGGATTGTGAGCAAACAGATGGTAGGAATATATGTGTCCATTTGGGTGCAAAGGAGGTTGAGAAGGCACATTAATAACTTGAAAGTTTCTCCAGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGTATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATCTGACTTCTGGTCAGAAGGATGGGGCAGAAATAAGACGAAACTCAGATGTTCATGAAATTCTTCGCCGCACTTGTTTCTCATCTGTTTTTGATGCAGATCAACCACAAACAATCCCATCTCATGATCAAATTTTCTGGTTTGGGGATTTGAATTATCGTATCAATATGATGGATGGGGAGGTTCGAAAGCTGGTAGCTCTAAAGAAATGGGATGAACTGATGAATTATGATCAGCTAAGTAATGAATTATGTAGTGGGCATGTGTTTGATGGATGGAAGGAGGGTTTGATAACCTTCCCACCCACTTACAAATATGAGATTAATTCTGATAAATATATTGGTGAGAACCCAAAAGAAGGGGAAAAGAAGAGATCACCAGCCTGGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAGGCAACTCGAATACAGGCGTTCAGAAAATAAGCTCTCAGATCATCGACCAGTTAGTTCAATATTCTCGGTTGATGTTGAAGTATTTGACCACCGCAAACTACAACGAGCTCTAAATTTCACAAGTGCAGCAGTACACCCTGAGGTTTTCCTTACAGAAGATGGTGATTTCACATATTAG 1881 0.3993 MKTRRGKRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDACSLKESRLGVREDNHPLRTQSIFPSQTSDTFCKGYKMRHRRGKSETLRVQYINTKEVRVTIGTWNVAGRLPCKDLDIEDWLCTNEPADIYIIGFQEVVPLNAGNVLGAEDNTPIRKWEAIIRRTLNKSSELESKHKSYSAPTSPVLRTSASANVLADTSDVNPLDTMNEEYLRTFDNDDLEQEELKDKIGSIGKNLQLRKIHDIDLQTILDWPERPLDAITHTDSSPKLRRVLSSSARIGFNWTDNSSKYGGVMKRSHHSSGNLGLLLKEQQVMPEEVMDTLDDLSDMLSDEEDDAFYELPNDKENNGVGNVKSHRKYVRIVSKQMVGIYVSIWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEIRRNSDVHEILRRTCFSSVFDADQPQTIPSHDQIFWFGDLNYRINMMDGEVRKLVALKKWDELMNYDQLSNELCSGHVFDGWKEGLITFPPTYKYEINSDKYIGENPKEGEKKRSPAWCDRILWLGKGIRQLEYRRSENKLSDHRPVSSIFSVDVEVFDHRKLQRALNFTSAAVHPEVFLTEDGDFTY 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01500 626 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 619 - -
Cca11g01500 626 Gene3D Endonuclease/exonuclease/phosphatase 313 616 IPR036691 -
Cca11g01500 626 SUPERFAMILY DNase I-like 95 609 IPR036691 -
Cca11g01500 626 SMART i5p_5 287 597 IPR000300 GO:0016791|GO:0046856
Cca11g01500 626 Gene3D Endonuclease/exonuclease/phosphatase 84 195 IPR036691 -
Cca11g01500 626 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 619 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01500 Cca-Chr11 37930265 37936325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01500 353 562 Acyl Lipid Metabolism Gene Families AT2G31830 35.294 4.69e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01500 K24221 - gmx:100794203 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01609 06 31249208 31253557 Cca11g01500 11 37930265 37936325 PCT