Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01609 ATGAAGGCGAGGAGAGGAAAACGTTCTGAGGCCTTCTGGCCTTCCATTGTGATGAAGAAATGGTTGAACATCAAGCCTAAGGTCAATGATTTTAGTGAAGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAGAGGCTCAAGATTGAGTGTGGGTGAAGATAATCCACTTAGAACAGAAGGGATTCAATCCATATTCCCAAGTCAAACATCAGTTGCATCTTATAAGGGCCACAAGACAAGACATAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATTGACACGAAGGAAGTGAGGGTTACAATTGGCACTTGGAATGTTGCTGGAAGACATCCATGTGAGGATCTTGAGATTGATGACTGGCTTTGTACTGAAGAGCCAGCTGATATTTACATTCTTGGTTTCCAGGAGGTGGTTCCACTGAATGCTGGAAATGTTCTAGGCGCTGAAGATAATACACCTATACCAAAATGGGAGGCAATCATTCGAAGATCTCTAAACAAATCTTCTGAGCCTGACAGTAAACACAAAAGCTACAGTGCCCCTCCTTCTCCAGTGTTAAGAACTTCTTCTGCGGCTGATATTCTAGCAGACACTATAGATGCTGATAATCCAATTGATATGATGATTGAGGAGTATGTAGCAACCGTTGACAATAATGAAGTGGAACAACAAGAAGTGAAAAACATAATTGATATAGAGAATAACTTACAGTTAAGGAGAATATATGGCATTGATATTAACTGGCCTGAGCGTTCATTAGATGCAGTCCCCCAAATTATTGATTCCAATTCAAAGTTGCGGAGAGTACTAAGCAGCTCAGCCAGAATTGGCTTTAACAGAAGTGAGAGTACTTTGATATATGGTGTTGGACTGAAACGTTCACACCACAGTTCTGGAAATTTGGGCTTGTTATGGGATGAACAGCAAGTGATACCTGAAGTTGTTGATGTCTCTGAAGTGTTGTCAGCTGAGGATGATGATGCTTTTAATGAATTACCTAATAACCAAGATGATAATGAATTAGGTACCATGAAATCATGTCAAAGTCCAAGGTATGTCCGGATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTGCAGAGGAGGTTGAGAAGGCACATTAATAATTTGAGTGTTTCCCCGGTTGGAGTTGGACTTATGGGCTACATGGGAAACAAGGGGTCGGTTTCGATTAGTATGTCTCTCTTTCAGTCACGTCTGTGCTTTGTGTGTTCCCATCTGACTTCTGGTCAGAAGGGAGGGGCTGAACATAGGCGAAACTCTGATGTTAATGAAATTCTGAGACGCACTTGCTTCTCATCTGTCTTTGATGCAGATCAACCACAAACAATTCCATCTCATGACCAGATTTTCTGGTTTGGGGATTTGAATTATCGTATCAATATGTTGGATTCTGAGGTCAGAAAATTGGTGGCTCTAAAGAAGTGGGATGAGCTCATGAATAATGATCAGCTAAGCAAAGAATTGCGTATTGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAGATTAACTCTGATAGATATGTCGGTGAGAGCCCAAAAGAAGGTGAAAAAAAGAGATCTCCAGCCTGGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAAACAACTACAATATGGACGTGCAGAAATTAAGCTCTCTGATCATAGACCACAGTACACCCAGAGATCTTTCTTGATGAAGATGGAGAAATATAATCATATTAGACATTCATTGAAGTACAATCATATTATAACCGGGTGTTAA 1833 0.4075 MKARRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSLRGSRLSVGEDNPLRTEGIQSIFPSQTSVASYKGHKTRHRRGKSETLRAQYIDTKEVRVTIGTWNVAGRHPCEDLEIDDWLCTEEPADIYILGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRSLNKSSEPDSKHKSYSAPPSPVLRTSSAADILADTIDADNPIDMMIEEYVATVDNNEVEQQEVKNIIDIENNLQLRRIYGIDINWPERSLDAVPQIIDSNSKLRRVLSSSARIGFNRSESTLIYGVGLKRSHHSSGNLGLLWDEQQVIPEVVDVSEVLSAEDDDAFNELPNNQDDNELGTMKSCQSPRYVRIVSKQMVGIYVSVWVQRRLRRHINNLSVSPVGVGLMGYMGNKGSVSISMSLFQSRLCFVCSHLTSGQKGGAEHRRNSDVNEILRRTCFSSVFDADQPQTIPSHDQIFWFGDLNYRINMLDSEVRKLVALKKWDELMNNDQLSKELRIGHVFDGWKEGLINFPPTYKYEINSDRYVGESPKEGEKKRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPQYTQRSFLMKMEKYNHIRHSLKYNHIITGC 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01609 610 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 596 - -
Cca06g01609 610 MobiDBLite consensus disorder prediction 32 59 - -
Cca06g01609 610 Gene3D Endonuclease/exonuclease/phosphatase 85 189 IPR036691 -
Cca06g01609 610 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 596 IPR045849 GO:0004445|GO:0046855
Cca06g01609 610 SUPERFAMILY DNase I-like 96 587 IPR036691 -
Cca06g01609 610 SMART i5p_5 286 595 IPR000300 GO:0016791|GO:0046856
Cca06g01609 610 Gene3D Endonuclease/exonuclease/phosphatase 306 608 IPR036691 -
Cca06g01609 610 MobiDBLite consensus disorder prediction 174 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01609 Cca-Chr6 31249208 31253557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01609 360 558 Acyl Lipid Metabolism Gene Families AT1G05630 34.513 1.77e-35 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01609 K24221 - ccaj:109800886 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01609 06 31249208 31253557 Cca11g01500 11 37930265 37936325 PCT