Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01231 ATGGCAGAAATTAGGCTCACCAGGGTGGAGCAAGGCCAAACCAAGATCAAAAATGTTCCAATAGCTGTGACCCCAGAAGGGTTTTGGTGCTGCCCTTCTCCTGTTGTGTTTCAGAAAAGCCTCAAGGCCCAAAACCCTCTCAACAAGCCCAAACCCTCTTCACCCCCGCCAAAAACCAGTGTTCAGAAGAAGCCAGTGTCTGTGCCAGTGTGTGAGAGAAGAGCTTCTGCAGCACCTGCCCCTTCAAGATTGGTGCTTTCTGATGATCAGCAATGTGCAACTGCTCCAGAGAGGCCTCCACCTACCACATCTGTGGCTGCAGAGAGGACACCTAGGCCCAAAATTGAATCTTTGCCAAAGAAGGTTGCTATTGAGTTTGGTGAACCCGGAACTTGTGATATGAAGGTGGTTTTGTTGGGAAAGCAGGGTTTTTGTGTCAAGTTGAGTGTGCACAGGGATGTTCTGACAGAGAAGAGTTGCTTCTTTTCTGAAAAACTCTCTGAACAATCCGGTTTGTCCTGTCTCCAAATCGGTGACTGTGAGGATGTTGAGATATATGTTGAAACTGTTGGTCTTATGTACTGTAAGGAGATGAAGCAGCGGCTTATGAAGCAAAGTGTTTCTCGCATTCTTCGAATACTCAAGGTAGCTGAATTCCTCGGCTTCAGCTCATGTATCCAGTCATGTTTGGAGTACTTGGAAGCAGTCCCTTGGGTTGGAGAAGAAGAGGAAGAAAAGGTGGTCTCAACTGTACTGCAACTCCAAGCTGAAGGAATTGGGGTCAATCCTGTGCTGAAAAGAGTGTCATCTGACATTTCTAATGTCCCAAAAGACACTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCAAAAGACCCTCTTTCCCACATCATTGA 942 0.4342 MAEIRLTRVEQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKAQNPLNKPKPSSPPPKTSVQKKPVSVPVCERRASAAPAPSRLVLSDDQQCATAPERPPPTTSVAAERTPRPKIESLPKKVAIEFGEPGTCDMKVVLLGKQGFCVKLSVHRDVLTEKSCFFSEKLSEQSGLSCLQIGDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLGFSSCIQSCLEYLEAVPWVGEEEEEKVVSTVLQLQAEGIGVNPVLKRVSSDISNVPKDTLXXXXXXXXXXXXXXXXXXXXXXXXPKRPSFPHH 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01231 313 MobiDBLite consensus disorder prediction 82 111 - -
Cca11g01231 313 Gene3D Potassium Channel Kv1.1; Chain A 126 257 IPR011333 -
Cca11g01231 313 Coils Coil 277 280 - -
Cca11g01231 313 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 281 IPR038920 -
Cca11g01231 313 MobiDBLite consensus disorder prediction 42 67 - -
Cca11g01231 313 PANTHER BTB/POZ DOMAIN PROTEIN 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01231 Cca-Chr11 31490631 31493593 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01231 - - pvu:PHAVU_003G250400g 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01400 06 28892319 28896742 Cca11g01231 11 31490631 31493593 PCT