Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01218 ATGGTGAAGGCGGCAATCTACTACCTCTCGGAGCACCCAGCTATCGTGGAGTACCGGTGGAGCCACGCCCAATCATGGGGCGCCACGTGGTCGTTCCTATTCAGctccatcgcctcctacctcctcctctccctcttcctccacctctccctctccctcttccGGCGGCGGCGCCCCATCCCGCTGGGCCCCCTCCCCGCCGCCCACAGCCTCTCCATGTCCCTCATCTCCGCCACCATCTTCGGGGGCATCCTGGTCTCCGCCGCCGCCGAGATCCGCGACACGCGGTGGTTCTGGCGGCGGTCGAAAACCCCCTTGGAGTGGCTCCTCTGCTTCCCCCTGGGGACCCGCCCCTCCGGCCGCGTGTTCTTCTGGTCGTACGTGTACTACCTCTCCCGCTTCCTCCACATGTTCCGCACCATCATCACCATCCTACGACGTCGTAGGTTGTCCTTTTTCCAACTCTTCAACCACTCAATCTCCGCCTTCATGTCCTTCCTCTGGCTGGAATTCTCCCAGTCCTTTCAGGTCCTGGCCATCCTCTTCGCCACGCTCCTATACGCCGTCGTTTACGCCTACCGCTTCTGGACCGCCATAGGCCTCCGCGCCGCCTGCTTCCCCTTCGTCCTCAATTGCCAGATCGCCTTGCTCGGCTGCAATGTCGCCTGCCACGTCGCCGTTTTCCTCCTTCATTTCTTCTTCAAAGGATCCTGCAACGGCATTGGCGCTTGGCTCTTCAACTCTGTTCTCAACTTCGCCGTTCTCATGCTCTTCCTTAACTTCTACGTCCGCATGCTCGTTGGCAAACGCAGAAACCTTCCCCATGCCCATCATGTCACCGTCGCTTCACACCTCGTTACTCCCGCTTTGTCTTAA 876 0.5616 MVKAAIYYLSEHPAIVEYRWSHAQSWGATWSFLFSSIASYLLLSLFLHLSLSLFRRRRPIPLGPLPAAHSLSMSLISATIFGGILVSAAAEIRDTRWFWRRSKTPLEWLLCFPLGTRPSGRVFFWSYVYYLSRFLHMFRTIITILRRRRLSFFQLFNHSISAFMSFLWLEFSQSFQVLAILFATLLYAVVYAYRFWTAIGLRAACFPFVLNCQIALLGCNVACHVAVFLLHFFFKGSCNGIGAWLFNSVLNFAVLMLFLNFYVRMLVGKRRNLPHAHHVTVASHLVTPALS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01218 291 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 2 273 IPR002076 GO:0009922|GO:0016021
Cca11g01218 291 Pfam GNS1/SUR4 family 29 267 IPR002076 GO:0009922|GO:0016021
Cca11g01218 291 PANTHER ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE 2 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01218 Cca-Chr11 31013897 31014772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01218 7 281 Acyl Lipid Metabolism Gene Families AT1G75000 60.714 1.93e-118 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01218 - - pvu:PHAVU_003G251300g 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01387 06 28769018 28771519 Cca11g01218 11 31013897 31014772 PCT