Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01387 ATGCAGAGGCTGAACTTCTACCTCTCAGAGCACCCCGCCATCGTGGGCTTCCGATGGAGCCACGCCCTCTGCTGGGGCTCCACGTGGTCCTTCCTGGTGTCCTCCATCGCCGTCTACGTCGTCGTTTCGATCTTCCTCCACCTGGTGCTGGCCCTCCTCCTCCGCCGCGGGAAGCCCGTCCCTCTGGGACCCTTACCCGCAATCCACAGCCTCTCCATGTCGCTCATCTCCGCCACCATCTTCGCGGGCCTTCTGGTCTCCGCCGCCGCCGAGATCAAGGAGACGCGGTGGTTCTGGCGGCGCTCCAAGACCCCGCTCCAGTGGCTCCTCTGTTTCCCCCTCGGGACGCGTCCCTCCGGCCGCGTCTTCTTCTGGTCCTACGTGTTCTACCTCTCGCGTTTCCTCCACATGCTCAGAACCGTTCTCGTCATATTACGACGTCGTAAGCTCGTTTTCTTCCACCTCTTCTACCACTCCATCTCCACCTTCATGTCCTTCCTCTGGCTCGAGTTCTCCCAGTCCTTCCAAGTTCTCGCCATTCTCTTCACCCCCCTCGCCTACTGCGTCACCTACGGCCACCGCTTCTGGGCCGCGATCGCCGCGCGTCGCCCCTGCTTCCCCCTCGTCCTCAACTTTCAGATCGCTCTCTTTGGATGCAACGTCGTTTGCCACGTTGCCGTCCTTTTGTTGCATTTTTTTAAAGGTGGCTGTAACGGCATCGGCGCCTGCCTCTTCAATGCCCTGCTTAACGCTGCTATTTTGTTGCCGTTTCTCAACTTCTACGTCCGAGTCTACTTTCGAAGGTCCACAAAACATAGTAACAAATTCTTCAACTTCAGTTAA 843 0.5836 MQRLNFYLSEHPAIVGFRWSHALCWGSTWSFLVSSIAVYVVVSIFLHLVLALLLRRGKPVPLGPLPAIHSLSMSLISATIFAGLLVSAAAEIKETRWFWRRSKTPLQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHMLRTVLVILRRRKLVFFHLFYHSISTFMSFLWLEFSQSFQVLAILFTPLAYCVTYGHRFWAAIAARRPCFPLVLNFQIALFGCNVVCHVAVLLLHFFKGGCNGIGACLFNALLNAAILLPFLNFYVRVYFRRSTKHSNKFFNFS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01387 280 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 3 273 IPR002076 GO:0009922|GO:0016021
Cca06g01387 280 PANTHER GNS1/SUR4 MEMBRANE FAMILY PROTEIN 3 273 - -
Cca06g01387 280 Pfam GNS1/SUR4 family 27 272 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01387 Cca-Chr6 28769018 28771519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01387 1 256 Acyl Lipid Metabolism Gene Families AT4G36830 60.618 3.70e-110 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01387 - - gmx:100782066 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01387 06 28769018 28771519 Cca06g01387 06 28769018 28771519 ECH
Cca06g01387 06 28769018 28771519 Cca11g01218 11 31013897 31014772 PCT