Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01196 ATGGCCATAGAAGTGAAAAGGAAGACTTCAATATGGCTGCTCTCGTGGTGCCTTATTATGGCCTACAACGTGAGTTTAGCAGAGAGAGTTTTGAAAGACCAAACACCTCAGAGTTTTGTTCCCAAACAAACACAAGGAGTTTTCATCAGTATAATTGATTTCTTCTGGAAGGATGGAGAGTCTTCCAATGACCGTGTTTGGCCCGAATTGAAGTTTGGTTGGAGAATCGTAGTAGGGTCAATCGTTGGATTTTTTGGAGCTGCGTTGGGTAGCGTAGGCGGGGTTGGAGGTGGCGGAATTTTTATCCCTATGCTCACTTTGATCATTGGTTTTGACGCTAAGACTTCCACAGCCATTTCTAAGTGTATGATTATGGGAGCAGCGGTATCGACTGTATACTACAACCTGAGGTTTAGACATCCAACATTAGACTTGCCAGTTATAGATTATGATCTGGCTTTGCTCTTCCAGCCTATGCTAATGCTAGGAATAAGCATTGGTGTTGCATTTAATGTCATGTTTGCTGATTGGATGGTGACAGTTTTGCTTATCATCTTATTCATTGGTACATCCACAAAAGCTTTATTCAAAGGCATAGATACATGGAAAAAGGAAACAATTATGAAAAAGGAAGCAGCTAAGATGTTGGAATCAGATTCTACTCCCGGTTATGCTTCTGAAGATGACTACAAGTCACTACCAGCTGGTTCAGCTGATCCACGAGATGAGGAGGTCCCTTTAATGAAGAACATCTACTGGAAAGAATTATTAGTCCTTGTGTATGTCTGGGTTGCTTTTCTCATTGTTCAGATTATTAAGACTTACAGCAAAACTTGCTCCATACTGTATTGGGTTCTTAATTCCTTGCAGGTGCCTATTGCAATCTCAGTTACGCTTTATGAAGCCATTTGCTTGTGCAATGGAACTAGAGTAATTGCATCAAAGGAAAAGGATATTACAGATTGGAAGAAGCTTCACAAGATCTGTCTTTACTGTTCCTGTGGAATAGTAGCTGGTATAGTTAGTGGACTGCTTGGTCTAGGAGGTGGCTTCATTTTGGGACCACTCTTTCTCGAGTTGGGAATTCCTCCTCAGGTTGCTAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCTATGTCAGTGGTACAGTATTACCTTCTAGAACGCTTCCCAGTACCCTATGCTTCTTACTTTGTTTTGATTGCAACCATTGCTGCATTAACTGGCCAGCATGTGGTGAGAAAGATAATTGCTATCTTCGGTCGAGCATCCATCATCATCTTTGTATTAGCATTCACCATTTTTTTGAGCGCAATCAGTTTAGGTGGAGTTGGAATTGAGAACATGGTTGAGAAGATGGAAAATGATGAGTATATGGGGTTTGCAAATATCTGCAATCAATCTTAG 1413 0.4098 MAIEVKRKTSIWLLSWCLIMAYNVSLAERVLKDQTPQSFVPKQTQGVFISIIDFFWKDGESSNDRVWPELKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDAKTSTAISKCMIMGAAVSTVYYNLRFRHPTLDLPVIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETIMKKEAAKMLESDSTPGYASEDDYKSLPAGSADPRDEEVPLMKNIYWKELLVLVYVWVAFLIVQIIKTYSKTCSILYWVLNSLQVPIAISVTLYEAICLCNGTRVIASKEKDITDWKKLHKICLYCSCGIVAGIVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYLLERFPVPYASYFVLIATIAALTGQHVVRKIIAIFGRASIIIFVLAFTIFLSAISLGGVGIENMVEKMENDEYMGFANICNQS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01196 470 Pfam Sulfite exporter TauE/SafE 81 190 IPR002781 GO:0016021
Cca11g01196 470 Pfam Sulfite exporter TauE/SafE 333 438 IPR002781 GO:0016021
Cca11g01196 470 PANTHER CEREBLON 11 468 - -
Cca11g01196 470 MobiDBLite consensus disorder prediction 219 239 - -
Cca11g01196 470 PANTHER PROTEIN, PUTATIVE-RELATED 11 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01196 Cca-Chr11 30141266 30146223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01196 - - ccaj:109792151 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01353 06 28397217 28402028 Cca11g01196 11 30141266 30146223 PCT