Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01353 ATGGCTACAAAAGTGAAACGCAAGACTTGTGCTATTGCTGCAGCAATATGGCTGGTTTTGTGTATCCTTACCATGATCTGCAATGTGAGTTTAGCAGAGAGAGTTTTGAAAGAAAAAGAATTAGGAAATGATGTTAAGAAAGAGAGACAAGGAGTTCTGAAAGCCATTATCAACTTCTTATGGGAGGACGGGAAGTCTTCCTATGAGCCTGTTTGGCCGAACATGAAATTTGGTTGGAGAATTATAGTAGGATCAATCATTGGATTTTTGGGAGCTGCATTGGGAAGCGTTGGAGGGGTTGGTGGTGGAGGAATTTTTGTGCCTATGCTTGCTTTGATCATTGGCTTTGACCCCAAGTCTTCTACGGCCATCTCTAAGTGTATGATTATGGGTGCATCTATATCAACTGTATACTACAATCTGAGGCTTAGACACCCAACACTAGACATGCCACTGATAGATTATGACCTGGCTTTGATTTTCCAGCCTATGCTAATGCTCGGAATAAGCATTGGTGTTATATGTAATGTCATGTTTGCTGATTGGATGGTGACAGTTTTGCTTATCATTCTATTCATAGCTACATCATCAAAAGCTACATACAAAGGCATAGACACATGGAGAAAGGAAACAATTGCAAAAAAGGAAGCATCCAAACTATTGGAAGCAGAACCGAAACCTGGTGATACTTCTGCAGATTACAAATCACTACCAAGTGGTCCAACTGATTCACTATTTGAGGAGACCCCTCTACTAAAGAACGTATATTGGAAAGAATTATCACTCCTCGCGTATGTCTGGGTGGCTTTTTTCATTGTTCAGATTGTTAAGGAATACAGCAAACCCTGCTCCACCCAGTTCTGGCTTCTTAATCTTTTGCAGGTTCCTATTGCGATCTCCGTTACACTCTTTGAAGCCATAGGGTTGTACAAAGGAACTAGGACGATTGCATCAAAGGGAAAGGAAATCACTAATTGGAAGATTCATCAAATTTGTCTCTACTGTTCAACTGGAATAGTAGCTGGTATGGTTGGTGGATTGCTTGGTCTAGGAGGTGGTTTTATTTTGGGGCCACTTTTTCTAGAATTGGGAATTCCTCCTCAGGTAGCAAGTGCTACATCAACTTTTGCCATGGTTTTCTCATCCTCCATGTCAGTGGTTCAATACTACTTATTGGATCGTTTCCCAGTACCGTATGCTTCCTACTTTGCTTTGGTTGCAACCATAGCTGCTTTCACTGGGCAGCATGTGGTGAGAAAGATAATTGTTGTCCTTGGGCGAGCATCCATTATCATCTTCATACTAGCACTGACCATTTTCATCAGCGCAATCAGTTTAGGTGGAGTGGGAATAGAGAACATAATTGAGAAGATAGAAAATCATGAGTACATGGGCTTTGAAGATCTCTGCGCCCTGTCTTAG 1422 0.4149 MATKVKRKTCAIAAAIWLVLCILTMICNVSLAERVLKEKELGNDVKKERQGVLKAIINFLWEDGKSSYEPVWPNMKFGWRIIVGSIIGFLGAALGSVGGVGGGGIFVPMLALIIGFDPKSSTAISKCMIMGASISTVYYNLRLRHPTLDMPLIDYDLALIFQPMLMLGISIGVICNVMFADWMVTVLLIILFIATSSKATYKGIDTWRKETIAKKEASKLLEAEPKPGDTSADYKSLPSGPTDSLFEETPLLKNVYWKELSLLAYVWVAFFIVQIVKEYSKPCSTQFWLLNLLQVPIAISVTLFEAIGLYKGTRTIASKGKEITNWKIHQICLYCSTGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYLLDRFPVPYASYFALVATIAAFTGQHVVRKIIVVLGRASIIIFILALTIFISAISLGGVGIENIIEKIENHEYMGFEDLCALS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01353 473 PANTHER PROTEIN, PUTATIVE-RELATED 14 470 - -
Cca06g01353 473 PANTHER CEREBLON 14 470 - -
Cca06g01353 473 Pfam Sulfite exporter TauE/SafE 337 441 IPR002781 GO:0016021
Cca06g01353 473 Pfam Sulfite exporter TauE/SafE 70 196 IPR002781 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01353 Cca-Chr6 28397217 28402028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01353 - - gmx:100801441 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01353 06 28397217 28402028 Cca06g01353 06 28397217 28402028 ECH
Cca06g01353 06 28397217 28402028 Cca11g01196 11 30141266 30146223 PCT