Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01172 ATGCCGACCTTTACTGCCATAGCATTTGATAGGTTGATAGAGCCTAGAGCTTCAAAACCTGCTTATAAATCTGCACCTGCCCCGATGCCTGTCCCAAAGAAGCTCGAGAGGAGAAGTAGTGAACCAACCGTAAAAAAGAAGCCCCTTCCTCGTCCTCAATTGAAGCCAGCACTCTATGCCACTCCTGCAGTGACGCCGCTCCCGGATTCACCCTCTTCGTTCCCTCCTTCTCCGTACATCATCAATCACAAGCGCCGTGGCCCGCGCCTCCTGAAGAGTTTTTCTGAGGCCAATGTGCAGGCCAAGCAGGAGGATCCTCATGGTGAAGATGCTAACGGTAAGGGCAACGAGGCTGTGGTCGCCAGTTCGGATGGTGATATCCAAGTAACTTCCACAAACATTGAACCTTTTAAGGAGGTGCAGGTGAATGGTGTACATGATGACAACCTTAGTAGCAGCAATGGTGGTGACCTTGGGAATGGACATGGGGAAAGTGAAAGTAGTGGTATTCTTAATGGGTCACACATGGATAAAATAGTTGCATTGAATTTGGTAAGAGATACCGAGAGTGAAGACTTTTTTGATCCGCATGATTCAATGAGTTTTAAAAGTTACACAGATGGTGAAGATATTACTGGTACAGAACAAACTATGAAATTCAATGCTGCTGGTGGGGAATTTTTTGATGCTTGGGAAGAACTCTCTTCTGATAGTGGGGTTCAAAATTCTCATCGTGATATTGAAGCTGAGTTGCGGGAAATAAGGTTGAGTCTATTGATGGAGATAGAGAAGCGGAAGCTAGTTGAAGAATCCCTTAACAGCATGCAAAGCCAGTGGGAGAGACTTAGACAAGGGTTATCTCAAGTGGGAATTGTGTTGCCTGCAGATCTTACTGCTGAGAGTGGGCAGCCGAGTTCTGACCCTCTGGAAGATGTATATCAGCAAATTTACATTGCTAGGTTCATATCAAACAGCATTGGGAGAGGAATTGCCAAGGCAGAAGCGCAGACAGAGATGGAAGCTCAATTAGAGTTAAAGAACTTTGAGATTGCTCGACTATTGGAACGTCTCCACTGTTATGAGACCATGAATAGGGAGATGTCTCAGAGGAATCAGGAAGCAGTAGAAATGGCACGGCGTGAGAGACAAAGAAGGAGGAGAAGGCAGAGATGGATTTGGGGCTCTATTACTACAGCCATTGCACTTGGTACTGCAGCAATAGCATGGTCCTATCTCCCGATGGGTAGAGAATCAACATCAGCAGTTCACGATGTGGCTCCTGAGCTCGATGACAGAGCCAACTAA 1305 0.4636 MPTFTAIAFDRLIEPRASKPAYKSAPAPMPVPKKLERRSSEPTVKKKPLPRPQLKPALYATPAVTPLPDSPSSFPPSPYIINHKRRGPRLLKSFSEANVQAKQEDPHGEDANGKGNEAVVASSDGDIQVTSTNIEPFKEVQVNGVHDDNLSSSNGGDLGNGHGESESSGILNGSHMDKIVALNLVRDTESEDFFDPHDSMSFKSYTDGEDITGTEQTMKFNAAGGEFFDAWEELSSDSGVQNSHRDIEAELREIRLSLLMEIEKRKLVEESLNSMQSQWERLRQGLSQVGIVLPADLTAESGQPSSDPLEDVYQQIYIARFISNSIGRGIAKAEAQTEMEAQLELKNFEIARLLERLHCYETMNREMSQRNQEAVEMARRERQRRRRRQRWIWGSITTAIALGTAAIAWSYLPMGRESTSAVHDVAPELDDRAN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01172 434 MobiDBLite consensus disorder prediction 15 78 - -
Cca11g01172 434 MobiDBLite consensus disorder prediction 98 117 - -
Cca11g01172 434 PANTHER PROTEIN, PUTATIVE-RELATED 1 433 - -
Cca11g01172 434 Coils Coil 364 384 - -
Cca11g01172 434 PANTHER BACTERIOPHAGE N4 ADSORPTION B PROTEIN 1 433 - -
Cca11g01172 434 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01172 Cca-Chr11 29450856 29455349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01172 - - gmx:100798468 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01314 06 27969742 27974253 Cca11g01172 11 29450856 29455349 PCT