Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01314 ATGCCGACTTTTACTGCCATAGCGTTGGATAGGTTGATAGAGCCGGGAGCTTCTAAGGCAGTTGATAAATCTGCTCCAACTTCAATGCCTGTCCCAAACTCGCAGAACCTGGAGAGAACTACGAATGTGTCAGCCAAGAAAACTAAGGTTCCTCGTCCTCCATTGAAGCCGGCACTTTATACCACTCCTGAGGTGACGCCGCTTCCGGATGCGCCTTCTTCGTTCCCTCCTTCGCCATATATAATCAACCACAAGCGCCGTGGTCCACGCCTCCTCAAGAGTTCCTCTGAGGCCAGTGTGCTGTCCGAGGTGAATATTCATGGTGGTGAAGATGTTAGCGACAAGAGCTTTGATGATGTTGTTGCAAGTTCGGCTGGTGACCTTCATGTTAGTTCTAGGAGCCCTGAGCTCGTTAAAGAGGAGCAGGTGAATGGTGTCCCTGACGGCAAACTTGATGGCAGCAATGATGCTGACCTTGCAAATGGACACATAGAAACTGGAAGTAGTAACTTGACTGATGGTTTACTCAAGGAAAAGCCATTGACATTGAATTTGGACAGAGATAGAGTGGTTGAGGACTTTTTTGACCCACGAGATTCAATGAGTTTCACGAGTAATACAGATGGGGAAGAGAATGCAGGGACAGAACTGTCTATGAAATTCAGCTGTTCTGGTGGGGAGTTTTATGATGCATGGGAAGAATTATCTTCCGAAAGCATGACACAAAGTTCTACACACCATACTGAAGCTGAATTGCGTGAAATAAGATTAAGTCTGTTGATGGAAATTGAGAAGCGGAAGCAAGCTGAAGAATCCCTTGACAACATGAGAAGCCTGTGGGAAAGTATTAGGCAAGGGTTATATCAAGTAGGCATCATTTTGCCTGCAGATCTTACCGCTGTTGCTGAGGGTGAGCAGCATATTTCTGATCCCGTTGAAGATCTATGTCAACAAGTTTATATTGCTCAGTTCATATCAAATACCATTGGAAAAGGGACTGCGAGGGCTGAGGTAGAGACAGAGATGGAAGCTCAACTAGAGGCAAAGAACTTTGAGATTGCTCGACTCTTAGAACGTCTCCACTGTTATGAGACCATGAATAGGGAGATGTCTCAGAGGAACCAAGAAGCAGTAGAGATGGCACGGCGTGAGAGGCAAAGGAGCAGCAAGAGGCAGAGATGGATTTGGGGCTCCATTACAACTGTGATTGCTCTTAGTACTGCTGCAATAGCATGGTCTTATCTCCCAACAGGTAAAGGATCGTCCTTCACTGACCACGATCTAGTTCCTGAACAAGATGATGCAGCCAAGTGA 1314 0.4635 MPTFTAIALDRLIEPGASKAVDKSAPTSMPVPNSQNLERTTNVSAKKTKVPRPPLKPALYTTPEVTPLPDAPSSFPPSPYIINHKRRGPRLLKSSSEASVLSEVNIHGGEDVSDKSFDDVVASSAGDLHVSSRSPELVKEEQVNGVPDGKLDGSNDADLANGHIETGSSNLTDGLLKEKPLTLNLDRDRVVEDFFDPRDSMSFTSNTDGEENAGTELSMKFSCSGGEFYDAWEELSSESMTQSSTHHTEAELREIRLSLLMEIEKRKQAEESLDNMRSLWESIRQGLYQVGIILPADLTAVAEGEQHISDPVEDLCQQVYIAQFISNTIGKGTARAEVETEMEAQLEAKNFEIARLLERLHCYETMNREMSQRNQEAVEMARRERQRSSKRQRWIWGSITTVIALSTAAIAWSYLPTGKGSSFTDHDLVPEQDDAAK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01314 437 PANTHER BACTERIOPHAGE N4 ADSORPTION B PROTEIN 1 436 - -
Cca06g01314 437 MobiDBLite consensus disorder prediction 16 72 - -
Cca06g01314 437 PANTHER PROTEIN, PUTATIVE-RELATED 1 436 - -
Cca06g01314 437 Coils Coil 367 387 - -
Cca06g01314 437 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01314 Cca-Chr6 27969742 27974253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01314 - - gmx:100792599 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01314 06 27969742 27974253 Cca06g01314 06 27969742 27974253 ECH
Cca06g01314 06 27969742 27974253 Cca11g01172 11 29450856 29455349 PCT