Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00980 ATGTCGTTTTGGACCCTATTCTTCGTGGCTCTGGTGCCGGTTATGGAGACCCTCTTGATTACTCTCCTTGGTTTATTCATTGCCACAGAACGCTTTAATCTCCTCAGAAGTGCTGATGCAAGAAATTGTTTGAACAATCTTTTGTTTTACATATTCACTCCGGCACTCCTCGTTGCTGATTTAGCTGAATCGATTACGTTTGAACGAATGGTTGAAATGTGGTTTATGGTGGTGAATATATTTTTAACATTCTTGGTTGGCTCTATTCTGGGTTGGATGCTTAATAAACTTGCCAAAACCCCTGAACACTTACGTGGCCTTGTCAATGGTTGTTGCGCTACTGGGAATTTGGGAAATTTGCTTCTTATTATTGTCCCTGCAGTTTGTGAGGAGAGCAGTAGCATATTTGGAGATTCATCCACCTGCTCGACTTATGGAGATGCTTATGCAGCAATATCAACAGGAGTAGGTACAGCTTTTATATGGTCATATTTGTTAATCATCATGGGTCCAAGTAAAGATAAAAGCACTCAAAATGAGAATTCTAGTGACACCACAACCAGTGCAATTTATTCTGCTGGAACTTTGGAAGAACTTCCGGCAAATATCACAGAACCATTACTTACTTCAACTGAGTCTGTGAGCATTGACAACCTTCCAGTTCATCTTCAATCACCATCAGACAGAAATGGGAGAAAG 699 0.4063 MSFWTLFFVALVPVMETLLITLLGLFIATERFNLLRSADARNCLNNLLFYIFTPALLVADLAESITFERMVEMWFMVVNIFLTFLVGSILGWMLNKLAKTPEHLRGLVNGCCATGNLGNLLLIIVPAVCEESSSIFGDSSTCSTYGDAYAAISTGVGTAFIWSYLLIIMGPSKDKSTQNENSSDTTTSAIYSAGTLEELPANITEPLLTSTESVSIDNLPVHLQSPSDRNGRK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00980 233 PANTHER PROTEIN PIN-LIKES 3-LIKE ISOFORM X1 1 191 - -
Cca11g00980 233 Pfam Membrane transport protein 11 203 IPR004776 GO:0016021|GO:0055085
Cca11g00980 233 PANTHER - 1 191 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00980 Cca-Chr11 21188657 21208115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00980 K24139 - ccaj:109811492 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00980 11 21188657 21208115 Cca11g00980 11 21188657 21208115 ECH
Cca06g01165 06 26038404 26048348 Cca11g00980 11 21188657 21208115 PCT