Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00894 ATGGGGTTGTTCAATGGTTCTGAGTATGTGCCTCTTGGTGAGTTATCTGCGCCAAGGGAGAATCATACAAGGAGAGTTTCTTTTCTTCCTTTGGTATTTATCATCTTCTACGAGGTTTCTGGGGGTCCCTTTGGTGTTGAGGACACAGTGCATGCAGCAGGTCCTTTGTTAGCCCTTCTGGGGTTCTTGGTTTTTCCATTCATATGGAGTGTTCCCGAGGCTTTGATCACTGCAGAGATGGGTACCATGTTCCCTGAAAATAGTGGTTATGTGGTTTGGGTCTCTTCTGCTTTGGGTCCCTTTTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTAAGTGGGGTGATTGATAATGCTTTGTACCCAGTTCTGTTTCTTGATTATCTGAAATCAGCAATCCCTGCATTGGGTGGTGGGGTTCCCAGAACTTTTGCAATTTGGGCCTTAATTGTGGTCTTCACTTACTTGAACTATAGGGGTTTAACCATTGTGGGGTTTGTTGCTGTTCTTTTAGGTGTTTTCTCACTCCTTCCCTTTGTGGTCATGGGGTTCCTGTCAATTCCACACTTGAAACCTTCCAGATGGTGTGTGACAAATCTGGATGATGTTGATTGGAACCTCTATTTGAATACTTTGTTTTGGAATCTCAATTATTGGGACTCTATTAGTACTCTTGCTGGGGAAGTGGAAAATCCAAGGAGAACTCTTCCCAAGGCTCTATTTTATGCTTTGATACTTGTGGTTCTGGGCTATTTCTTCCCTCTGTTAATTGGCACCGGTGCTGTTCCCCTCAATAGGGAGTTGTGGAGTGATGGGTACTTCTCAGATATTGCTAATATTGTTGGAGGAGTGTGGTTGAGATTGTGGCTTCAAGCTGCTGCTGCAATGTCAAACATGGGAATGTTTGTTACTGAAATGAGCAGTGACTCATTCCAGCTTCTAGGCATGGCTGAGAGGGGCATGTTACCTGAGTTCTTTGGCAAGAGGTCTCGCTATGGAACACCTCTTATAGGCATACTCTTTTCAGCCTCTGGTGTGATTCTACTATCATGGCTGAGTTTTCAAGAGATTGTGGCTGCTGAAAACTTTTTGTATTGTTTTGGCATGATTTTGGAGTTTGTTGCATTCATATTGTTGAGGATCAAACACCCCAATGCATCTAGGCCTTACAGGATCCCGGGGGGAACAACTGGAGCAATTGCTATGTGCATTCCCCCCACAATTTTGATTTTTGTGGTTCTGGCTTTCTCATCCAACAAAGTATTGGTTATAAGCCTCATTGCTGTGGCCATTGGCCTTGTGATGCAACCTTGTCTTAAATTTATGGAGGAAAAGGGATGGATGAGGTTCTCAGTTAGGTATGAGTTCCATGATCTTGACAATGAGGAGAGCTTGCACTCTTTTGTGAGTTAG 1413 0.4402 MGLFNGSEYVPLGELSAPRENHTRRVSFLPLVFIIFYEVSGGPFGVEDTVHAAGPLLALLGFLVFPFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAIPALGGGVPRTFAIWALIVVFTYLNYRGLTIVGFVAVLLGVFSLLPFVVMGFLSIPHLKPSRWCVTNLDDVDWNLYLNTLFWNLNYWDSISTLAGEVENPRRTLPKALFYALILVVLGYFFPLLIGTGAVPLNRELWSDGYFSDIANIVGGVWLRLWLQAAAAMSNMGMFVTEMSSDSFQLLGMAERGMLPEFFGKRSRYGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFVAFILLRIKHPNASRPYRIPGGTTGAIAMCIPPTILIFVVLAFSSNKVLVISLIAVAIGLVMQPCLKFMEEKGWMRFSVRYEFHDLDNEESLHSFVS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00894 470 PIRSF AA_transporter 15 462 - -
Cca11g00894 470 Pfam Amino acid permease 27 431 IPR002293 GO:0016020|GO:0022857|GO:0055085
Cca11g00894 470 PANTHER POLYAMINE TRANSPORTER PUT1 1 462 - -
Cca11g00894 470 Gene3D Amino acid/polyamine transporter I 20 447 - -
Cca11g00894 470 PANTHER POLYAMINE TRANSPORTER PUT1 1 462 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00894 Cca-Chr11 18140982 18143070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00894 6 462 Organic Solute Cotransporters AT1G31830 72.926 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00894 - - gmx:100810822 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01079 06 24854693 24857381 Cca11g00894 11 18140982 18143070 PCT