Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca11g00816 | ATGGCGGAGAAGAGATTCGGCGTGATAGGATACGCGCTGGCGCCGAAGAAGCAGAACAGCTTCATCCGCGACTCGCTGGTGAGTCTGGCGAAATCGCGAGGCGTGGAACTCGTGCGCGTCGACTCGGAGAAGCCCCTCGCGGATCAGGGCCCCTTCGATTGCGTCCTCCACAAGCTCTACGGCGACGATTGGAAGCGCCAGCTCCGAGAGTTCCAGAGTCGGTACCCTAATGCGGTGATCCTGGACGCGCCGGAAGCGATCGAGCGCCTCCACAACCGAATCTCGATGCTGCAGGTGGTGTCGGAGCTCGAAATCGAGGACCGAAGCGAAACCTTCGGGATCCCGAAGCAGATTGTGATATACGACAAGGCCACGCTGGTGGACCCGCAGGCGTGGGAGAGCCTCAAGTTTCCGGTGATCGCGAAGCCGCTCGTCGCCGACGGCAGCGCGAAGTCGCACAAGATGGCGCTCGTGTTCACGCGGGACGCGCTCAACAAGCTGAAGCCGCCGATCGTGCTTCAGGAGTTCGTCAACCACGGCGGCGTCATCTTCAAGGTGTACGTCGTGGGCGAGCACGTGCGGTGCGTGAAGCGCAAGTCGCTCCCCGACGTATCCGAGGAGAAGGCGCTCGGCGTTTCGGAGGACCTTCTGTCGTTTTCGCAGGTCTCCAACTTGGCCAACCACGACGCTGTAAACGACAGCGACGGGTATTACCAGTTGATGCATTTGGACGACACCGAGATGCCCCCAAACGCCTTCGTCGTCGACATCGCCAGGGGCCTCAGGCGCGCCCTCAAGTTGAATCTCTTCAACTTCGATGTCATAAGGGACGCTCGATTCGGGAACCGCTACCTCATCATTGATATTAACTATTTCCCTGGCTACGCCAAAATGCCTGGCTACGAGGCCGTTTTGACCCAGTTTTTCTGCGATGTAATGCTCCAGAAACACCATCAGGGGGAGCCTCAAGTGCAGGTTCTAAGCAATGAGGGTGACGTTCCCGTTTCGCCTAACGAGAAAGAGGAATCTCTTCAAGTTTAA | 1041 | 0.5841 | MAEKRFGVIGYALAPKKQNSFIRDSLVSLAKSRGVELVRVDSEKPLADQGPFDCVLHKLYGDDWKRQLREFQSRYPNAVILDAPEAIERLHNRISMLQVVSELEIEDRSETFGIPKQIVIYDKATLVDPQAWESLKFPVIAKPLVADGSAKSHKMALVFTRDALNKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVSEEKALGVSEDLLSFSQVSNLANHDAVNDSDGYYQLMHLDDTEMPPNAFVVDIARGLRRALKLNLFNFDVIRDARFGNRYLIIDINYFPGYAKMPGYEAVLTQFFCDVMLQKHHQGEPQVQVLSNEGDVPVSPNEKEESLQV | 346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca11g00816 | 346 | Gene3D | - | 85 | 294 | - | - | |
| Cca11g00816 | 346 | PIRSF | ITPK | 1 | 325 | IPR008656 | GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726 | |
| Cca11g00816 | 346 | Pfam | Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain | 8 | 87 | IPR041429 | - | |
| Cca11g00816 | 346 | SUPERFAMILY | Glutathione synthetase ATP-binding domain-like | 84 | 297 | - | - | |
| Cca11g00816 | 346 | Pfam | Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain | 108 | 310 | IPR040464 | - | |
| Cca11g00816 | 346 | PANTHER | INOSITOL-TETRAKISPHOSPHATE 1-KINASE | 1 | 329 | IPR008656 | GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726 | |
| Cca11g00816 | 346 | MobiDBLite | consensus disorder prediction | 323 | 346 | - | - | |
| Cca11g00816 | 346 | PANTHER | INOSITOL-TETRAKISPHOSPHATE 1-KINASE | 1 | 329 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca11g00816 | Cca-Chr11 | 15615956 | 15617750 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca11g00816 | K00913 | - | gmx:100127430 | 588.571 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca11g00816 | 11 | 15615956 | 15617750 | Cca11g00816 | 11 | 15615956 | 15617750 | ECH | |
| Cca06g00971 | 06 | 23447476 | 23449178 | Cca11g00816 | 11 | 15615956 | 15617750 | PCT |