Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00706 ATGGACATGGCTGTGGATGTGTTTCCATGGACAAAACCAAAACCAAGGAAGACACACCCTCTTTCTCTTGGTGGAACAAGACACCAACAATGTCGACAAACACACACCTATTTGTCAACCAAACGAAGCTTCTCAAACATGCGCTCCCTTGTGAATTTTCTCCTTGTCGTTTCTACCCTTTGTCTTTCTCCTGTTCATTCCTCACAATTGGGTAGCAACCAAACTTTTCTCCCAAAGGAAGAGTTCCGCAAGTTGAACGCCATAAGAAACCGTCTTCAGAAAATCAACAAGCCAGCTGTTAAGACAATTCAGAGTCCTGATGGAGATATTATAGACTGTGTTGTGTCTCATAAGCAACCAGCTTTTGATCATCCTCAACTGAAAGGACACAAACCATTGGATCCTCCAGAAAGACCAAGAGGGCATAACGAAATGGGTGATTGGAGTGAGAATTTTCAGTTGTGGAGGCTATCGGGTGAGTCGTGTCCCGAAGGAACGATTCCGATTAGAAGAACAATGGAGCAAGACATGTTAAGAGCTAGCTCTGTTCGCAGATTTGGAAGGAAAAAAATAATAAACCGTGTCAGAAGGGACACCAGTGGCAATGGACATGAGCATGCAATTGGGTATGTGACAGGGGATCAGTACTACGGAGCAAAGGCTAGCATAAACGTGTGGGCACCCCTTGTAGAAAACCCAAATGAATTCAGCTTGTCTCAAATGTGGGTCATTTCTGGTTCATTTGGGGATGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGCCCGGAGCTATATGGAGACAGCTACCCTAGATTCTTTACTTATTGGACGACTGATGCATACCAAGCAACTGGGTGTTACAATTTACTTTGCTCGGGCTTTGTTCAAACTAACAGTAAAATTGCAATTGGAGCAGCAATCTCTCCAACTTCTTCATATAGTGGTGGCCAATTTGATATTAGCTTACTCATTTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAATTTGGATCGGGGATCCTAGTTGGGTACTGGCCATCTTTCTTGTTCTCCCACTTAGGGGATCATGCAAGCATGATTCAATTTGGTGGAGAAGTAGTGAATTTAGGGTCATCAGGGTCTCACACTTCCACCCAAATGGGTAGTGGACATTTTGCGGAAGAGGGTTTTGCAAAAGCTTCATATTTTAGGAACATGCAAGTTGTGGATTGGGACAACAACTTAATTCCCTTGTCAAATCTAAAGGTGCTTGCAGATCACCCCAATTGCTATGACATACAAGGAGGGTTTAATAATGCGTGGGGGAATTATTTTTACTATGGTGGACCTGGAAGAAATGTAAAGTGTCCCTAA 1359 0.4364 MDMAVDVFPWTKPKPRKTHPLSLGGTRHQQCRQTHTYLSTKRSFSNMRSLVNFLLVVSTLCLSPVHSSQLGSNQTFLPKEEFRKLNAIRNRLQKINKPAVKTIQSPDGDIIDCVVSHKQPAFDHPQLKGHKPLDPPERPRGHNEMGDWSENFQLWRLSGESCPEGTIPIRRTMEQDMLRASSVRRFGRKKIINRVRRDTSGNGHEHAIGYVTGDQYYGAKASINVWAPLVENPNEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDSYPRFFTYWTTDAYQATGCYNLLCSGFVQTNSKIAIGAAISPTSSYSGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFSHLGDHASMIQFGGEVVNLGSSGSHTSTQMGSGHFAEEGFAKASYFRNMQVVDWDNNLIPLSNLKVLADHPNCYDIQGGFNNAWGNYFYYGGPGRNVKCP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00706 452 MobiDBLite consensus disorder prediction 123 141 - -
Cca11g00706 452 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 32 452 - -
Cca11g00706 452 Gene3D - 229 340 - -
Cca11g00706 452 MobiDBLite consensus disorder prediction 122 141 - -
Cca11g00706 452 Pfam Neprosin activation peptide 102 210 IPR025521 -
Cca11g00706 452 PANTHER - 32 452 - -
Cca11g00706 452 Pfam Neprosin 234 445 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00706 Cca-Chr11 12031461 12035732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00706 - - gmx:100788950 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00706 11 12031461 12035732 Cca11g00706 11 12031461 12035732 ECH
Cca06g00844 06 21577178 21581646 Cca11g00706 11 12031461 12035732 PCT