Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00844 ATGTGTTGGATAGATGTGTTTCCCTTGGCAGAATCAAAGACTAGGAACACACACTTTTGTTTTGTGCATGGAAGAAGAAGAAGACAAAGCCAATGTGAACAAACACACAAGGATTTGTCAATAGAAACAAGGAAGTCAAATTTCTCAAGCATGGATTTTAGCTTGTGTTTGAGCTCCCCAATCATTTCCACACTTGTACATTTCCTTCTTGTTGCTTCTTTGCTTTGTCCTGTTTGTTCCTCACAAATGGGAACCACCCTAGTTGCCAACAACACTCTTAAGCCGCAAGAAGAGGTTCACAAGATGGACATCATAAGAACTCGTCTTCAACAGATCAACAAGGCCGCCGTTAAGACAATTCAGAGTCCTGATGGTGATGTAATAGACTGTGTGGTGTCTCATCAGCAACCAGCCTTTGATCATCCTATGTTGAAGGGACACAAACCACTGGATCCTCCAGAAAGGCCAAAAGGTCATAACAAAATGGACATATTGAGCGAGAATTTTCAGTTATGGACCATGTCAGGAGAGTCTTGTCCAGAAGGTACAATTCCAATTAGAAGAACAACAGAACAAGATATGTTAAGGGCTAGTTCTGTTAGCAGATTTGGAAGAAAAGTAAGAAGACGTGTTAGAAGGGACACCAACAGCAATGGACATGAGCATGCAGTTGGGTATGTGAGTGGTGCACAGTACTATGGAGCAAAAGCCAGCATAAACGTGTGGGCACCTCGAGTGGCAAATCAAGATGAATTCAGTTTGTCCCAAATGTGGGTCATATCTGGTTCATTTGGGGATGATCTCAACACTATTGAAGCTGGTTGGCAGGTCAGCCCGGAGCTCTATGGGGACAGATACCCCAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACTGGGTGCTACAATTTACTGTGCTCAGGATTTGTTCAAACTAACAATAGAATTGCAATTGGAGCTGCAATCTCTCCAACTTCTTCTTATGCGGGTGGACAATTTGATATTAGCTTGCTTATCTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAGTTTGGATCAGGAATCTTAGTTGGGTATTGGCCATCATTTTTGTTCACTCACCTAAGGGATCATGCAAGCATGGTGCAATTTGGTGGAGAAGTTGTGAATTCAAGGCAATCAGGGTCTCACACTTCAACCCAAATGGGTAGTGGACATTTTGCAGGAGAAGGTTTTGGAAAAGCTTCATATTTTAGGAATATGCAAGTTGTGGATTGGGATAACAACTTGGTACCCTTGTCGAATCTTAGGGTTCTTGCGGATCACCCGAATTGCTATGACATACAAGGAGGGATTAATAATGTTTGGGGAAATTACTTTTACTATGGTGGACCTGGGAGAAACATAAGATGTCCCTAA 1407 0.4243 MCWIDVFPLAESKTRNTHFCFVHGRRRRQSQCEQTHKDLSIETRKSNFSSMDFSLCLSSPIISTLVHFLLVASLLCPVCSSQMGTTLVANNTLKPQEEVHKMDIIRTRLQQINKAAVKTIQSPDGDVIDCVVSHQQPAFDHPMLKGHKPLDPPERPKGHNKMDILSENFQLWTMSGESCPEGTIPIRRTTEQDMLRASSVSRFGRKVRRRVRRDTNSNGHEHAVGYVSGAQYYGAKASINVWAPRVANQDEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDRYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEVVNSRQSGSHTSTQMGSGHFAGEGFGKASYFRNMQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNIRCP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00844 468 Gene3D - 241 357 - -
Cca06g00844 468 Pfam Neprosin 249 461 IPR004314 -
Cca06g00844 468 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 49 468 - -
Cca06g00844 468 Pfam Neprosin activation peptide 119 226 IPR025521 -
Cca06g00844 468 PANTHER - 49 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00844 Cca-Chr6 21577178 21581646 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00844 - - gmx:100776135 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00844 06 21577178 21581646 Cca06g00844 06 21577178 21581646 ECH
Cca06g00844 06 21577178 21581646 Cca11g00706 11 12031461 12035732 PCT