Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00695 ATGCATGTTCTTTTTTCTGTGAAGAGACTCGCCTTCTCTGACCCGTTTCTGTCACATAGAAGAAGACTCTTTTCTGGGTTCAGTTTAGGCGTAGCAGCTTCTCTTGTTTTGTTGTCACTCTTCCTTCTTAGTATCTCCCTCAGGGTTCCCAAAGTTGCAGTCTTTGTTCCACAACTTCACACTTTTGGTGCAAACTCTTCGTTTGGTCCATGCCCCTTGTCTTCCTTCGACACTGACAGCACTTCCAACACTTCGAAGTCTCGCGGGTATGAGAGTTCTGTGAAGAGAATTGAAGTAGGAAGTGTTGTGAATAATGTGTCAGATGAAAGCATGAAGAGTGGAAGTGGGAGGGGTTTGGAGAATTCTAGTTTTGCTTCTATTTTGTGGTCAGAGAGTAAGAACGGGGAAAGGAACTTGAAGAATGTAACTGTCACTCATGATGAGAAGATGCATGTTGGTTTATATGAGAACTGTGACATTTTTGATGGAAAGTGGGTAAGGGATGATTCAAAGCCATATTATCCTTTAGGGTCTTGTCCCCTCATTGATAGAGATTTTGATTGTCACAGTAATGGGAGGCCTGATGTTGAATATGTTAAATGGAGGTGGCAGCCAAAAGGGTGCAAAATTCCAAGTTTGAATGCAACTGATTTTCTGGAGAGGTTGCGGGGACAGAGGCTAGTTTTCGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCACTCGTGTGCATTCTCCGTCAAAGCATAAGGAACAAGAAACGGGTTTTTGAAATTTCAGGAAAAAGGGAGTTTAAGAAGAAAGGTGTCTATTCTTTTAGATTTGAGGACTATAATTGTTCGGTGGATTTTGTTGTTTCACCATTCATTGTTCAAGAGTCAACTTTCAAGGGCAAAAATGGGTCGTTTGAGACATTAAGATTGGATTTGATGGACCGAACTACGACCAGGTATCGGGATGCTAATATCATAGTCTTCAACACAGGTCATTGGTGGACCCATGATAAAACATCAAAAGGAGAAGATTATTACCAAGAAGGAAACCATGTATACCCAAGACTCAAGGTTCTAGATGCATATACAAGGGCCTTGACCACTTGGGCTAAATGGGTTGACCGAAAAATTAATGCCAATCAAACTCAGGTTTTCTTCAGAGGATACTCAGTCACCCATTTCTGGGGTGGACAATGGAATTCAGGAGGACAGTGCCACAAAGAAACTGAGCCAATACTTAATGAAACTTACTTACAAAAGCATCCTTCAAAAATGTGGGCTCTAGAACATGTCATCCAACAAATGAAAACTCCAATAGTTTACATGAACATAAGTAGGCTTACAGATTACAGAAAAGATGGCCATCCTTCAGTATACAGAAAGGAGTACAAGACATCAATGGATCAAAACTCTACCGCGCTGTTTGAAGATTGCAGTCATTGGTGCTTGCCTGGGGTACCAGATACTTGGAATGAATTACTATATGTTTCTCTCTTAAAATATGGTAAGGGAACTTGGAGAAGCTGA 1521 0.4135 MHVLFSVKRLAFSDPFLSHRRRLFSGFSLGVAASLVLLSLFLLSISLRVPKVAVFVPQLHTFGANSSFGPCPLSSFDTDSTSNTSKSRGYESSVKRIEVGSVVNNVSDESMKSGSGRGLENSSFASILWSESKNGERNLKNVTVTHDEKMHVGLYENCDIFDGKWVRDDSKPYYPLGSCPLIDRDFDCHSNGRPDVEYVKWRWQPKGCKIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLVCILRQSIRNKKRVFEISGKREFKKKGVYSFRFEDYNCSVDFVVSPFIVQESTFKGKNGSFETLRLDLMDRTTTRYRDANIIVFNTGHWWTHDKTSKGEDYYQEGNHVYPRLKVLDAYTRALTTWAKWVDRKINANQTQVFFRGYSVTHFWGGQWNSGGQCHKETEPILNETYLQKHPSKMWALEHVIQQMKTPIVYMNISRLTDYRKDGHPSVYRKEYKTSMDQNSTALFEDCSHWCLPGVPDTWNELLYVSLLKYGKGTWRS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00695 506 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 504 - -
Cca11g00695 506 Pfam PMR5 N terminal Domain 157 209 IPR025846 -
Cca11g00695 506 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 210 493 IPR026057 GO:0016740
Cca11g00695 506 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 504 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00695 Cca-Chr11 11776240 11779742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00695 - - gmx:100798751 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00695 11 11776240 11779742 Cca11g00695 11 11776240 11779742 ECH
Cca06g00837 06 21470394 21475220 Cca11g00695 11 11776240 11779742 PCT