Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00694 ATGAGTTTCTTCACAGGGTCTTCAAGCCACACATGGCAACCCACCATAACTTCAGATACTACTGCCCTAAGTTATTGGTTGAATTGGAGGTTCTTCTTCTGTGCACTATGGATTTTAGCCTCCATGGCTCTAGCATTTTTTTTAATATTCAAGTATGAAGGATTCAATAGATCAACATCAAATGGAGGAGAAAATCAGGGTGAAGAAGAAGCTGGATTGGTATATGAGGATGAAGCATGGAATACCTGTCTTGAAGGAATTGATCCTTCATGGCTTCTCATTTATAGAATAATTTGTTTTATTGTGCTTTTGGCTTTGATCATTGCCAGTGTGGCTGCAGATGGAGGAGCCATATTTTACTTCTACACTCAATGGACCTTTACTTTGGTCACTATTTACTTCGGGTTTGGATCATATTTCTCCTTATATGGATGTTCCCTAAAACCCAATAAATTTGTGAGCAACGCAGTCAATGGTACCTCTCTAGATGCAGAAGTAGGCACTTACATAGTTCCCACTATTGATGGATCTTCAAATATGCCTAACTTGCCCAAGAGTCCTGATCAGGAATTTCATACTAGAAAAATTGCTGGTTTGTGGGGTTACATTTTTCAAATAATTTTTCAGACATGTGCAGGTGCTGTAGTGCTAACTGACTCTGTGTTCTGGTTCATCCTTTATCCAAATCTTACGTCCAAAGATTATAGTGTTGATTTTTTGATTTTTTGTATGCATTCCATTAATGCTCTTTTCCTCCTCGGTGACACGTCATTGAATTGCATGAGATTTCCAATGTTTCGATTTGCATATTTTGTCTTGTGGACGGCTATTTTTGTGATTTTTCAGTGGATCATCCATGTTTGTGTTTCACTTTGGTGGCCTTACCCTTTCCTTGATTTGAAATCCGCATATGCACCCTTATGGTACTTGGCTGTGGCTTTGATGCATTTTCCATGCTATGGCCTTTTTGCTTTAATAGTAAGGATGAAGCAATTGTGGTTATCAAGATCATTTCCAGGGTCTTCTCGGTTTGTACGGTGA 1041 0.3881 MSFFTGSSSHTWQPTITSDTTALSYWLNWRFFFCALWILASMALAFFLIFKYEGFNRSTSNGGENQGEEEAGLVYEDEAWNTCLEGIDPSWLLIYRIICFIVLLALIIASVAADGGAIFYFYTQWTFTLVTIYFGFGSYFSLYGCSLKPNKFVSNAVNGTSLDAEVGTYIVPTIDGSSNMPNLPKSPDQEFHTRKIAGLWGYIFQIIFQTCAGAVVLTDSVFWFILYPNLTSKDYSVDFLIFCMHSINALFLLGDTSLNCMRFPMFRFAYFVLWTAIFVIFQWIIHVCVSLWWPYPFLDLKSAYAPLWYLAVALMHFPCYGLFALIVRMKQLWLSRSFPGSSRFVR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00694 346 PANTHER UNCHARACTERIZED 17 346 - -
Cca11g00694 346 PANTHER PROTEIN, PUTATIVE-RELATED 17 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00694 Cca-Chr11 11701582 11704876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00694 - - gmx:100801420 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00694 11 11701582 11704876 Cca11g00694 11 11701582 11704876 ECH
Cca11g00694 11 11701582 11704876 Cca03g00460 03 7228452 7231205 ECH
Cca11g00694 11 11701582 11704876 Cca11g01829 11 43302888 43306062 ECH
Cca06g00830 06 21356595 21362847 Cca11g00694 11 11701582 11704876 PCT