Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00460 ATGAGTTTCCTAACAGACCCTCACAAGGACTCATGGCAGCCAATTATGACTGCTAAGACAAACCAACAGAGTTACTGGCTCAATTGGAGAGTTTTGCTTTGTGCCATATGGATTCTGGTTTCACTCATCTTGTCATCATTGCTTATATGGAAGTATGAAAGTTTGAGGAAACCAGCAAGAAGTGGAAGCAGGGACACACAAGAAGAAACTTCAGCAACTTTGTATGAGGATGAAACTTGGAGGCCTTGCCTGAAAGGAGTTCACCCTGCATGGCTCATGGCTTTCAGGGTTGTGGCATTTATTGTGCTTTTGGTGCTTCTCATAATCAATGCAGCTGTTGATGGAGGAAGCATTTTCCACTATTACACTCAGTGGACTTTCACTTCAATCACCATTTATTTTGGGCTGGGATCTTTGCTCTCCATTTATGGATGTTACCAACATCACAAGAAAGCAACTGGGGATAAGGTTGATAATGTGGATGGAGATGCAGAGCAAGGAATGAATAATGCTTCTGCCCTCCCACAAAGCTCTAGTCCTTCATACCATGAGAAAAGCCAGGGAGCCCCAGAAGAAGTTCTTGTTCGCCAACATGCAGGCATTTGGGGTTACATTTTTCAAATAATATTCCAGATTAATGCCGGTGCTGTCATGCTCACTGATTGTGTATTTTGGTTCATAATTGTTCCATTTCTAACCATCAAAGATTACAATCTAAATTTTTTGATAGTCATTATGCACTCAATCAATGCAGTTTTCCTTATAGGTGATACAGCTTTAAATTGTCTGAGATTCCCTTGGTTCAGAATAGGATACTTTTGCCTATGGACAGTCACATATGTGATTTTCCAGTGGATTGTTCATGCTTGCATTAATCTCTGGTGGCCGTATCCATTTCTTGACTTGTCATCCTCGTATGCTCCATTATGGTACTTTGCGGTGGCATTATTGCAGATTCCATGCTATGGAATTTTCGCTTTGTTAATGAAGCTGAAACATTATGTCTTGTCAACACGGTATCCAGACTCGTATCAATGTGTTAGATGA 1047 0.4088 MSFLTDPHKDSWQPIMTAKTNQQSYWLNWRVLLCAIWILVSLILSSLLIWKYESLRKPARSGSRDTQEETSATLYEDETWRPCLKGVHPAWLMAFRVVAFIVLLVLLIINAAVDGGSIFHYYTQWTFTSITIYFGLGSLLSIYGCYQHHKKATGDKVDNVDGDAEQGMNNASALPQSSSPSYHEKSQGAPEEVLVRQHAGIWGYIFQIIFQINAGAVMLTDCVFWFIIVPFLTIKDYNLNFLIVIMHSINAVFLIGDTALNCLRFPWFRIGYFCLWTVTYVIFQWIVHACINLWWPYPFLDLSSSYAPLWYFAVALLQIPCYGIFALLMKLKHYVLSTRYPDSYQCVR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00460 348 PANTHER PROTEIN, PUTATIVE-RELATED 10 348 - -
Cca03g00460 348 PANTHER UNCHARACTERIZED 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00460 Cca-Chr3 7228452 7231205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00460 - - gmx:100799543 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00460 03 7228452 7231205 Cca11g01829 11 43302888 43306062 ECH
Cca11g00694 11 11701582 11704876 Cca03g00460 03 7228452 7231205 ECH
Cca03g00460 03 7228452 7231205 Cca03g00460 03 7228452 7231205 ECH
Cca11g01829 11 43302888 43306062 Cca03g00460 03 7228452 7231205 PCT