Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00681 ATGGCTGGAAATCAAATCCATTTTGACAACAAAGAAAATGTTGAAGAACAAAAAGAATTTAGTTTCGCATGCAATGATCTCAAAGGAGCACTTATATTTGCTGATGAGATCTTTGACAATGGCAAGATCCGGCCATCGTTCGCTAGTTTTGACCAATCCATTGTTCTTACCACCATATTTGATGACAACACCTTACCTCTTCAACAACCACTGAGAAAGCTCCTTGCTATTGAGCAACCAAATAACTTTTCCTTTCAATCAAAAGGTATATCGAAAATTTCATGCAATGAGATTTCACCAAAAGTTACAATGGTTGAAGTGGGTGCTTCAAATAACAAATGCAAGAAGAGCAAATCAACGGGTTTCTCAAAGACATGCAAATTTCGAAAATACATTAAGCGTCGAACAACTAGTGAAGGACAAGACACTTTTGTTTTCTTGAATCCTTCGGGTTCAATGCCAATGAGTTCCTATGATGCGAAGGTACAGGATGTTTTTTCAAATAAAGAAAAGGGTGAAAAGATTCAAACAACTTTATCCCCCCATGAGAAGTTTTACGTGATGAATAGAAAGAGGACAGAAAATAGTAAACAAAAATCATTCCTACCTTATAGGCAAAACTTGATTGGGTTCTTCACCAACAAAAATAGATTTAGTAAGAATGTTAATCCTTTTTGA 678 0.3555 MAGNQIHFDNKENVEEQKEFSFACNDLKGALIFADEIFDNGKIRPSFASFDQSIVLTTIFDDNTLPLQQPLRKLLAIEQPNNFSFQSKGISKISCNEISPKVTMVEVGASNNKCKKSKSTGFSKTCKFRKYIKRRTTSEGQDTFVFLNPSGSMPMSSYDAKVQDVFSNKEKGEKIQTTLSPHEKFYVMNRKRTENSKQKSFLPYRQNLIGFFTNKNRFSKNVNPF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00681 225 Pfam Protein of unknown function (DUF1645) 34 203 IPR012442 -
Cca11g00681 225 PANTHER DUF1645 FAMILY PROTEIN 2 221 - -
Cca11g00681 225 PANTHER - 2 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00681 Cca-Chr11 11405670 11406347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00681 - - gmx:102668895 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00821 06 21231083 21232211 Cca11g00681 11 11405670 11406347 PCT