Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca06g00821 | ATGCAAGCCGTTTCGGTTTTACCTTTGTCGTCTAACTTTAGGGATTCTTCCGACGAGTTCGCTGAGTCTTCTGGAAAGTTCGAACACGATTTCATGGCCAAGCTCAAAATCgaagaacgcgaaaacaaagagaagcgtaacgaagatgatgtagaagcggaagagaatgaagaagaggaatcggaagaagaagaagaGTTTAGCTTCGTGCTCGCGAATCCCGACGGCTCGCTGATCTCCGCCGACGACGCCTTCGACAACGGCCAGATTCGTCCGATTTTTCCGATTTTCAACCAGGATCTTCTGTTCTCCGACGAGTACGACGGCGGCGCGCCGATCCAGGTCTTCGTCGAGCATCAGGACGATGCTCCGTCGCCGTCGGCGACGGAGCCAGCGGCGGAGGGACCGTACTGCGAGTGGACTCCGAAATCGGCGGTGAAGAGCAACTCCACGGGATTCTCGAAGCTGTGGAGGTTCCGTGACGTGAAGCTGCGGAGCAGCAGCGACGGAAAGGACGCGTTCGTTTTCCTGAGCAACGCGCCGGGGGCGAAGGCGGAGAAGGCGCGAAACGTGGTGGTGAAGAAGGTTGAGATGCGGAAGGGGAAAACGGCGTTGTCGTCGGCGCACGAGAAGCATTACGTTATGAACAGAGCGAGGAAAGAGAGCGATAAACGCAAGTCGTATTTGCCGTATCGGCAAGATCTGTTCGGATTCTTCGCCAACTCCAACGGATTGAGCAGGAACGTTCATCCTTATTGA | 759 | 0.498 | MQAVSVLPLSSNFRDSSDEFAESSGKFEHDFMAKLKIEERENKEKRNEDDVEAEENEEEESEEEEEFSFVLANPDGSLISADDAFDNGQIRPIFPIFNQDLLFSDEYDGGAPIQVFVEHQDDAPSPSATEPAAEGPYCEWTPKSAVKSNSTGFSKLWRFRDVKLRSSSDGKDAFVFLSNAPGAKAEKARNVVVKKVEMRKGKTALSSAHEKHYVMNRARKESDKRKSYLPYRQDLFGFFANSNGLSRNVHPY | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca06g00821 | 252 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Cca06g00821 | 252 | MobiDBLite | consensus disorder prediction | 37 | 67 | - | - | |
| Cca06g00821 | 252 | PANTHER | DUF1645 FAMILY PROTEIN | 1 | 248 | - | - | |
| Cca06g00821 | 252 | MobiDBLite | consensus disorder prediction | 51 | 67 | - | - | |
| Cca06g00821 | 252 | PANTHER | - | 1 | 248 | - | - | |
| Cca06g00821 | 252 | Pfam | Protein of unknown function (DUF1645) | 81 | 230 | IPR012442 | - | |
| Cca06g00821 | 252 | Coils | Coil | 37 | 64 | - | - | |
| Cca06g00821 | 252 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca06g00821 | Cca-Chr6 | 21231083 | 21232211 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca06g00821 | - | - | ccaj:109801205 | 454.907 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca06g00821 | 06 | 21231083 | 21232211 | Cca06g00821 | 06 | 21231083 | 21232211 | ECH | |
| Cca06g00821 | 06 | 21231083 | 21232211 | Cca11g00681 | 11 | 11405670 | 11406347 | PCT |