Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00654 ATGGCTTCTCTTTCCACCTTCCTCACACTCACTCTCTCCCTTCTCTCACTTCACGTTAACGCCAAAGAAGTGGTCATCCCCGAAGACGGTTACACGGTGAGCACCATCTTCGACGGCCACAAGCCTCACATCTACCCCTTCAGCCTCCTCCAACGACCCTCTTCCTCCGATCTCATCCTTCTCGATTTCGTCAACAGCACTTTCTACACCGCGCAATTCCCCATTTCCCAAGAAACCGTTTTCACCAGGTTTTCTGGAGATGGGTCTGTCGGGTATTTGGATGGGGACGTGGGTTCGGCTCGGTTTGCCAAACCCAGAAGCTTTGCTTTTGATCTCAGAGGGAATGTGTATGTTGCTGACAAGTCCAACCATGCAATAAGGAAAATTAGCGCTAAGGGTGTGACCACAATTGCTGGAGGACGGTTCTCAGAAAAGTCAAGCACAAAGGATGGACCTGCCCTGAATGCATCGTTTTCAAATGATTTTGACCTGACTTTCATTCCTGGTCTGTGTGCTTTGCTGGTGTCAGATCACATGCATCAATTGGTCCGCCAGATTAATTTGAAGGAGGAGGATTGTACCCTTGGTTCTAATTCCGGGCTAGGTGCAGTTATGACTTGGACTCTAGCATTAGGACTTTCATGCTTACTGGGCTTACTAATTGGGATTGCAGTGCGCCCTTACATCATTCCTAATAAAGGCTACAACCCTTGCCGATTCATCGTGACATGGAAGCATTGCCTAACCAGTCTGGGGAAGCTAGTGACGATGCTCTTCTTCGGCACGAAAAGCGCAGTTGCTAGCTATAGTTGTTCCTCTGTTTGCACATTCCTGACGAGGCTTTGGAGATTGTGTTTCTCTCATCTTGTTTGCATGTCTAGAGTTAGAATCAACATAGTGACTGAAAGACCACATCTAGAATCGGTGTCTTTGCTAGATTTAGATGGCTACAATAGTGGGGAGGTAATAAAGGCAAGTAAGTATCATGACCAATTGAAGGATTTGATGAGTTTTGATGAAGATTCAACCAAGGCAACCTTCAACAAGGGGTATGAAGGTGATGATGTCATGATAAAGGCTAACATGGGCTTCGTAGAGCTACCTAAGGATAACATTTTTCAACAAGGATCATCTGTGTGTAATTTGGGTATTGTGAAGCGTAGATGA 1167 0.4602 MASLSTFLTLTLSLLSLHVNAKEVVIPEDGYTVSTIFDGHKPHIYPFSLLQRPSSSDLILLDFVNSTFYTAQFPISQETVFTRFSGDGSVGYLDGDVGSARFAKPRSFAFDLRGNVYVADKSNHAIRKISAKGVTTIAGGRFSEKSSTKDGPALNASFSNDFDLTFIPGLCALLVSDHMHQLVRQINLKEEDCTLGSNSGLGAVMTWTLALGLSCLLGLLIGIAVRPYIIPNKGYNPCRFIVTWKHCLTSLGKLVTMLFFGTKSAVASYSCSSVCTFLTRLWRLCFSHLVCMSRVRINIVTERPHLESVSLLDLDGYNSGEVIKASKYHDQLKDLMSFDEDSTKATFNKGYEGDDVMIKANMGFVELPKDNIFQQGSSVCNLGIVKRR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00654 388 PANTHER NHL DOMAIN-CONTAINING PROTEIN 3 371 - -
Cca11g00654 388 PANTHER - 3 371 - -
Cca11g00654 388 Gene3D - 28 187 IPR011042 -
Cca11g00654 388 SUPERFAMILY Calcium-dependent phosphotriesterase 28 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00654 Cca-Chr11 10750983 10754809 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00654 - - gmx:100816542 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00654 11 10750983 10754809 Cca11g00654 11 10750983 10754809 ECH
Cca06g00806 06 20978357 20999291 Cca11g00654 11 10750983 10754809 PCT