Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00601 ATGGCCTATTATGCAGTTCCCACCTCTCTAACTTCCTTTGCAACAATGGACGTAACAAAAGAGAATAAAGTTCTTCTTCACTCACTCTCCAGCAAAGGCTTATGCAACCATTCAGCAATCACGAGGTCTTACTCTAGCAATCTTATGTATTACTCCTTTAACCGCATCCAAGCCACATCAATGCAACCAAAGCATAAAAGCAGCCACTCAGAAACAAGCAGGGACATGAACATGAGGCAAAAGGGTATCAATATTCAGGAAAACATGGTGGAAAGCAGCGAAGAAGACATGATAAATAGAGCCAACTGGGTACACATATTAATGAAAATTAAGACATATTGGAGAGGCAAACTACCTAAAGAGAGCATGGATCCGGATATAATATGCAAACACAACATGAATAATCAGTGTGATTGTGATGAAGATGTCAGTTTTTGTGTGGCAGGTTATGAAGAAGGAGATGAAAAGGAGGAAGATGGACAAGGTGTGACATGTGATTGTGACTCTTTCTCAAAATTTTTGGTCCCAGTTTCGTGGTATGATACCAAACTATTCTCTAAGTTAGCTTTGCTATGCAACATGGCTTATGCCATACCACAAATCAAGGCTAAGGACTTGGAGAGATACAATGGTCTTCAATTCGTAACATCATCTTTGGAAAAGAAAGGTGACGTGACTAAGATAAAAGCAAAACTTGATCAGGATTCCATTTGTGTGCCTATGGATGCCTCAGTAGCCTCTCATCAAGATGGCTCAGAGAAAGGTGATGATAATGAACAGAAGCATCAAACTAAGGACCTTTTGTCTCTTGCTTCCAAGTCACAGCAACATAGTGGCAATGAAGATTGCAATGGAAGAGAAGACTCACCACATGAGGAGGCTGATGAAACCCCACAGGTTCAGAAATCAAAGTTGACAGTTAATGTTGCTGCATTAACAATGACTGTTGTGGCTGCAGCAGGAACAGCAATGGGCCTTCAGTTAGTTCGTTCCTCATCTTGTGAATGGTTTGTTTGTGATGATCCCAATACACACACTCGATGCTTTGTCATTCAGGGATCTTATTCTGTGGCATCTTGGCAAGCAAACCTCTCCTTTGAGCCTACCACATTTGAGGACACAGATGTACTTGTTCACAGTGGAATATATGAAGCTGCCAAGGGAATATATGAGCAATTCATGCCAGAAATAATGGACCATTTAAAGAGACATGGGGATAGTGCAAAGTTTCAATTCACTGGTCATTCTCTAGGGGGTAGTCTCTCACTTTTGGTCTATTTGATGCTACTGACTAGGAAGGTTGTGAGTCCCTCAACTCTTCAGCCAGTTGTGACTTTTGGTTCTCCATTTGTGTTATGTGGAGGCCAAAGATTACTCAATGACCTTGGCCTGGATGAGAGCCACATTCAATGTGTAATAATGCATAGAGATATTGTTCCCAGGATCTTCTCATGCAGTTTCCCTAACCATGTTATAACCGTCCTTAAGCGCTTCAATGGCTCATTTGAATCACATCCTTGTCTGATAAAAAAGAAGCTGTTGTACTCACCATTGGGTAAAATATTCATTCTCCAACCAGATGAGAAAACATCTCCTTCACATCCTTTTCTTCCAGCAGGAAGTGGCTTGTATGCTCTAGACAATAGCAAATGTGGATACTCTCCAATTGTCCTCAGAGCCTTCCTCAATCAACCGCACCCCCTTGAAACACTGAGCAATCCAACAGCATATGGCTCAGATGGCACAGTTTTAAGAGACCATGACTGCAACAACTATCTTAAAGCAGTCAATGGAGTTTTTGGACAACATTCAAATATTATTGTCAGGACAGGGAGATCAAAGAAGCCACCAAAAATATTTAAGAAAAAGATGAGAAAATAG 1881 0.4104 MAYYAVPTSLTSFATMDVTKENKVLLHSLSSKGLCNHSAITRSYSSNLMYYSFNRIQATSMQPKHKSSHSETSRDMNMRQKGINIQENMVESSEEDMINRANWVHILMKIKTYWRGKLPKESMDPDIICKHNMNNQCDCDEDVSFCVAGYEEGDEKEEDGQGVTCDCDSFSKFLVPVSWYDTKLFSKLALLCNMAYAIPQIKAKDLERYNGLQFVTSSLEKKGDVTKIKAKLDQDSICVPMDASVASHQDGSEKGDDNEQKHQTKDLLSLASKSQQHSGNEDCNGREDSPHEEADETPQVQKSKLTVNVAALTMTVVAAAGTAMGLQLVRSSSCEWFVCDDPNTHTRCFVIQGSYSVASWQANLSFEPTTFEDTDVLVHSGIYEAAKGIYEQFMPEIMDHLKRHGDSAKFQFTGHSLGGSLSLLVYLMLLTRKVVSPSTLQPVVTFGSPFVLCGGQRLLNDLGLDESHIQCVIMHRDIVPRIFSCSFPNHVITVLKRFNGSFESHPCLIKKKLLYSPLGKIFILQPDEKTSPSHPFLPAGSGLYALDNSKCGYSPIVLRAFLNQPHPLETLSNPTAYGSDGTVLRDHDCNNYLKAVNGVFGQHSNIIVRTGRSKKPPKIFKKKMRK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00601 626 MobiDBLite consensus disorder prediction 280 299 - -
Cca11g00601 626 SUPERFAMILY alpha/beta-Hydrolases 332 521 IPR029058 -
Cca11g00601 626 MobiDBLite consensus disorder prediction 249 265 - -
Cca11g00601 626 MobiDBLite consensus disorder prediction 271 302 - -
Cca11g00601 626 MobiDBLite consensus disorder prediction 246 265 - -
Cca11g00601 626 Gene3D alpha/beta hydrolase 264 512 IPR029058 -
Cca11g00601 626 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 72 615 IPR043367 GO:0008970
Cca11g00601 626 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 5 70 IPR043367 GO:0008970
Cca11g00601 626 CDD Lipase_3 300 486 - -
Cca11g00601 626 Pfam Lipase (class 3) 349 485 IPR002921 GO:0006629
Cca11g00601 626 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 72 615 - -
Cca11g00601 626 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 5 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00601 Cca-Chr11 9731500 9734873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00601 1 615 Acyl Lipid Metabolism Gene Families AT3G61680 48.992 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00601 - - gmx:100796262 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00601 11 9731500 9734873 Cca11g00601 11 9731500 9734873 ECH
Cca03g03143 03 52869113 52872026 Cca11g00601 11 9731500 9734873 PCT