Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03143 ATGGCTCACACTGCAGTTGCCATGCCTACCTCTCCAGCAGCTATCTCTGCATCTACGGACATTGCAAAAGAGCATAATGGTCTTCGTCGTTCCCAATCCAGCACAGAACTATGCACACGTTCCATCATGCGGAGGTCTTATTCTGATAACCACCTATGTTGCTGCATCAATCGCACACAAGCCACATCAGTGTCACCAAAACTTAAGAGCAATCGGTCATTGGGAATTTCTCCATTCCAATTTTCAGGCTCCATTCTTCCAAATTCACTGCGGTCCTTGTTGTTTGACCCAGAAACAAGCAAGGATATGAGTGTGGGGGATAAGGAGGTAAGTATTGAGGAAAACATGGTTGAAAGCAGCAAAGAAGAGATTGTAAATAGAGCCAACTGGGTAGAGAGACTTATGGAAATCAAGAAACATTGGAGAAACAGATTACCAAAAGAAAGCATGGACCCAGATGCGATATGCAACAGCAATAAGTatgatgaatgtgaatgtgatgcagatgacagtgtttgtgtggttggtgaagacgaagatgagcatgaagtgacatatgatcgtgaatCATTCTCAAAGTTTTTGGTTCAAGTACCATGGTCTGATACCAAACTATACTCTCAACTTGCTTTCCTGTGCAATATGGCCTATGTAATACCCCAAATCAAGGCTAAGGACTTGCGAAGATACTACAACCTTCAATTTATAACATCTTCTTTAGAAAAGAAAGCCGAAGTGGCCAAGTTAAAAGTTAAACTTGATCAAGACTCCACTCGCGTTCCTATAGATGACCCGGTAGTCTCTCAAGATGTCTCAGAGAAAGGCAAAGATACTACACCGAAGCATCAAATGCAAGTAGCTTATGATATTGCTGCCTCAGCGGCCTCTTATGTTCAATTACGAGCTAAGGGACTCATGTACCATGCTGCTAGGTCACAACAGGGTGAAAATGAAGATTCTAATGAAAAAGGAGAAGATCTAGAAGGCACTTCACGAGGTTACAAATCAGAGGTTGCAGCTTATGTTGCGGCATCCACAATGACTGCAATGGTTGCAGCAGGGGAGAAGGAAAAGCAAGAAGCAGCAAAGGATCTCCAGTCACTTCATTCCTCACCTTGTGAATGGTTTGTTTGTGATGATCCCAACAATTACACTAGATGCTTTGTAATTCAGGGGTCAGACTCCCTGGCATCTTGGCAAGCAAACCTCTTCTTTGAGCCAACCAAATTCGAGGGCACAGACGTACTTGTTCACAGAGGAATTTATGAAGCTGCAAAAGGAATATACAAGCAATTCATGCCGGAAATAATGGACCATTTGAAGAGACACGGGGATCGCGCAAAGCTTCAATTCACTGGGCACTCCCTTGGGGGTAGTCTTTCTCTTTTGGTTCATTTGATGCTATTGACTAACAAGGTTGTTAGTCCCTCCACTCTTCGACCAGTTGTCACTTTTGGCTCACCATTTGTGTTTTGTGGAGGCCAACAAATAATCAATGAACTTGGTCTGGATGAGAGCCACATCCACAGTGTGATGATGCATAGAGATATTGTTCCTAGAGCCTTCTCCTGCAATTACCCAAATCACGTTGCTGTAGTCCTTAAACGCTTAAACAGCTCATTTAGGTCACATCCTTGTCTGCTAAAAAATAAGCTGTTATACTCACCACTTGGTAAAATATTCATTCTCCAACCCAATGACAAGACATCTCCTCCGCATCCTTTACTCCCTCCAGGAAGTGCCTTCTATGTCTTGGACAATACTAAATGTGGATACTCTTCAAGTGTTCTAAAAGCCTTCCTGAATCAACCACACCCTATTCACACACTAAGTCATCCAACAGCGTATGGTTCAGCAGGCTCAATTCTAAGAGACCATGACTCCAGCAACTACCTTAAAGCTATGAATGGAGTCTTGAGGCAACATTCAAAGACTCTTGTTCGCAGAGTGAGGAAGCAACGGATTAATCAGCTGTGGCCACTATTGACATCACCGTCACCACACTCTTGGAGCCATGAACAGAACTTGGAGCCATGCAGATTGATGACAAAGGAGATGGTCTCACTCACAAGGGTTTAA 2079 0.4165 MAHTAVAMPTSPAAISASTDIAKEHNGLRRSQSSTELCTRSIMRRSYSDNHLCCCINRTQATSVSPKLKSNRSLGISPFQFSGSILPNSLRSLLFDPETSKDMSVGDKEVSIEENMVESSKEEIVNRANWVERLMEIKKHWRNRLPKESMDPDAICNSNKYDECECDADDSVCVVGEDEDEHEVTYDRESFSKFLVQVPWSDTKLYSQLAFLCNMAYVIPQIKAKDLRRYYNLQFITSSLEKKAEVAKLKVKLDQDSTRVPIDDPVVSQDVSEKGKDTTPKHQMQVAYDIAASAASYVQLRAKGLMYHAARSQQGENEDSNEKGEDLEGTSRGYKSEVAAYVAASTMTAMVAAGEKEKQEAAKDLQSLHSSPCEWFVCDDPNNYTRCFVIQGSDSLASWQANLFFEPTKFEGTDVLVHRGIYEAAKGIYKQFMPEIMDHLKRHGDRAKLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLRPVVTFGSPFVFCGGQQIINELGLDESHIHSVMMHRDIVPRAFSCNYPNHVAVVLKRLNSSFRSHPCLLKNKLLYSPLGKIFILQPNDKTSPPHPLLPPGSAFYVLDNTKCGYSSSVLKAFLNQPHPIHTLSHPTAYGSAGSILRDHDSSNYLKAMNGVLRQHSKTLVRRVRKQRINQLWPLLTSPSPHSWSHEQNLEPCRLMTKEMVSLTRV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03143 692 Gene3D alpha/beta hydrolase 330 551 IPR029058 -
Cca03g03143 692 CDD Lipase_3 339 527 - -
Cca03g03143 692 MobiDBLite consensus disorder prediction 315 331 - -
Cca03g03143 692 Pfam Lipase (class 3) 388 525 IPR002921 GO:0006629
Cca03g03143 692 SUPERFAMILY alpha/beta-Hydrolases 371 561 IPR029058 -
Cca03g03143 692 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 1 688 IPR043367 GO:0008970
Cca03g03143 692 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 1 688 - -
Cca03g03143 692 MobiDBLite consensus disorder prediction 310 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03143 Cca-Chr3 52869113 52872026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03143 1 664 Acyl Lipid Metabolism Gene Families AT3G61680 56.418 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03143 - - gmx:100790575 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03143 03 52869113 52872026 Cca03g03143 03 52869113 52872026 ECH
Cca03g03143 03 52869113 52872026 Cca11g00601 11 9731500 9734873 PCT