Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00599 ATGGGCGAACATGAGGGGTGGGCACAGCCACCTAGTGGGCTATTGCCAAATGGTTTGTTGCCCAATGAAGCTGCCTCTGTGATACAGGTGCTTGACTCAGAGCGGTGGATGAAAGCTGAGCAAAGGACTGCAGAGCTGATTGCCTGCATCCAGCCTAATCCGCCCTCTGAGGAGCGCCGGAATGCAGTTGCCGACTATGTCCAACGGCTGATCACGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGATCTGTACCCCTCAAAACATATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATCTGAAGGATACATGGGCACATCAGGTTCGTGACATGCTGGAAAATGAGGAGAAGAATGAGAATGCCGAGTTTCATGTCAAGGAGGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAGTGTCTCGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAACCAAAATCATTTATTCAAGCGTAGCATTATCCTTATAAAAGCTTGGTGTTACTACGAGAGCCGAATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCCTTAGAAACCTTGGTTCTTTACATTTTTCATGTTTTCAACAATTCTTTTGCTGGACCACTTGAGGTATTGTATCGATTTTTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTCTGTGTAAGTCTATGGGGTCCAGTACCTATTAGTTCTCTCCCAGATGTGACAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTGAGCAAGTTATTTCTCGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCCTTTGTCTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGCCGTAGTGTCAGCAAAGGGAATTTCTTTAGGATACGCAGTGCCTTTGCATTTGGAGCAAAAAAGCTGGCTAGGTTACTTGATTGTCCAGAGGAGGAATTGTTTTCTGAGGTCAATCAGTTCTTTTTTAACACTTGGGACAGACATGGAAGTGGGGAAAGGCCTGATGTTCCAAGCATTGATTTACAGCGTTTGAGTTTATACAGTCATGATCAATTACAGCGGTCTGAGAATCTCCGGAACAATAACCATAAAATTGATAATGCTTCCAATCATGAACCTAATGAAGGGGAACATGTTTCACAAAGTGGTCTATCTCAGTATAGTAATTTATCATCTGAAAAGTTATCTAGAAGTGTTGTTTCTACAGTGTCACATACTCAGTATCCAAAGAGTTATGGAAGCCAAAATAATTCAAGGACCTTTGATCAAGTCCAAAGGGAAACTAATTCCAATCAAGGTGCTCATGTTGATAAGGGTCAGAGAAATGTTAAAGCTGATAACCTACTGAGTGATGTTCAAGGAAGGTTTCTATTTGCCAGGACACGATCTAGCCCTGAGCTGACTGACTCATATGGTGATGTTTCTTCCCAAGGAAGGCGTACAAAAGCAACAGAAAGTAATAAAGGCCAGAGTTCCTTTGCAAATTTGGAGAATAATCGTAGGAAGAATGTTGAGCTTGATGTAGCTGCAAGAACCGATGAGTCATCTGCTAGGCACATCTCATCTCGTCAAGTTCTTGAAAATGCTGCTGATTCCAATAGTAATCATGATGAATCAGGCGCAGGTGTCATCAGTGAAGAGTTTGCATCTGTTGCTGGTGCTGGTGGAATGCAGATGATGCATCAAGAGGAGCAGGACCTTGTGAATATGATGACATCTCCCACAGCTCAGGGTTTCAGTGGTCAGACTCATCTTCCAATGAATATTGCACCAGGTCACCTACCATTTCCCTTTCCACCTTCCATTCTTGCATCAATGGGATATGGTCAGAGAAATATTCCCTTCATTGAGGCTCCTTGGGGTACTAATATGCAATTTTCTCAAGGTTTCTTCCCTTCACCGTTAACTTCATATTTCCCTGGTGTAGGAATGACCTCAAACCCTCAAGATTTACTTGAAACTAACAATGAGAATTTCAGTTCGGTTGAGATGAACTTAACAGAAGCTGATAATGATTACTGGCATGAACAGGAAAGGGGTTCTGCTAGTGAGGCTGAAGTTGACAACGGGAATTTTGAAATGCTTCCAGAGGATAGGCAACAGTCTACTTCAGGTAGTTATAACTCTGCCCCGTTGTCTCGGGTAGGCAGCACCAACAGCAACAGTTCTGCAAGAGTTCAACAGAAGTTTGCTAGAGAAAACCGGGGGTCAACAAGAGATGAGCATATCGATAATTTTCATTATCAAGATAACCGAAGAAATGAGGTTTACTTTGATGATAGAACAGCGAATTCTGAGTTGTCTAGTGCACCTCCTTCGAGCTCCTTCAGGAGTAGGACCTCTTCTGAAAGCTCTTGGGATGGGTCGTCAGCCAAATCTTCAAAATCAACAAGGGAGAGAAGGGGGAGAAAAAATACTCCGACAATGCCATCTCCTGTTTATGCTAAGGGTAAGAATGTTTCAGAAATTTCATCTAATCGAGTAGATGATGAGAACAGAGATTGGACTCCTTTGTCGACTATGGCATCTGATGTGTCAGAAAAAAGCACTTGGTCCACATCTGGTACTTCCATGAATGTTCAAAGGAATCAAATATCTGGTTTAGAAACTGCTCAGACAAGTGGATCAGATTCTCCATTACCCATAGCTCCAGTGCTTTTAGGTCCTGGTTCTCGCCAAAGAGGAATCGATAATTCTGGGGTTGTACCATTTACATTCTATCCTACAGGGCCACCTGTTCCCTTTGTTACAATGCTTCCTTTATATAATTTTCCAACTGAATCTTCTGACACTGCAACAAATAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATTCAAGTCAGAATTTTGATTCATCTGAGGGATATGAACACCCTGAGGTGTCAAACTCAAGCCCTTCCAATTCTGTGACAAGGGTGGCTAGTCAGTCATCAGAGCACAAGCCTGACATTCTTAATAGTGACTTTGTTAGCCACTGGCAAAATTTGCAATATGGTCGATTTTGTCAAAACTCACGTGGTCCACCTTCAATGATCTATCCTTCACCTGTTATGGTGCCTCCTGTTTATTTGCAGGGTCGATATCCTTGGGATGGTCCTGGAAGACCTCTTTCTGGTAACATGAATATTTTCAGTCAGCTTATGAGCTATGGGCCTAGACTGGTTCCAGTTGCTCCTCTTCAATCAGTTTCTAATAGACCCACTAATATCTATCAACGTTACGTAGATGATATGCCACGGTATCGAAGTGGGACGGGAACCTACCTTCCAAATCCGGTATGA 3417 0.4267 MGEHEGWAQPPSGLLPNGLLPNEAASVIQVLDSERWMKAEQRTAELIACIQPNPPSEERRNAVADYVQRLITKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKKLARLLDCPEEELFSEVNQFFFNTWDRHGSGERPDVPSIDLQRLSLYSHDQLQRSENLRNNNHKIDNASNHEPNEGEHVSQSGLSQYSNLSSEKLSRSVVSTVSHTQYPKSYGSQNNSRTFDQVQRETNSNQGAHVDKGQRNVKADNLLSDVQGRFLFARTRSSPELTDSYGDVSSQGRRTKATESNKGQSSFANLENNRRKNVELDVAARTDESSARHISSRQVLENAADSNSNHDESGAGVISEEFASVAGAGGMQMMHQEEQDLVNMMTSPTAQGFSGQTHLPMNIAPGHLPFPFPPSILASMGYGQRNIPFIEAPWGTNMQFSQGFFPSPLTSYFPGVGMTSNPQDLLETNNENFSSVEMNLTEADNDYWHEQERGSASEAEVDNGNFEMLPEDRQQSTSGSYNSAPLSRVGSTNSNSSARVQQKFARENRGSTRDEHIDNFHYQDNRRNEVYFDDRTANSELSSAPPSSSFRSRTSSESSWDGSSAKSSKSTRERRGRKNTPTMPSPVYAKGKNVSEISSNRVDDENRDWTPLSTMASDVSEKSTWSTSGTSMNVQRNQISGLETAQTSGSDSPLPIAPVLLGPGSRQRGIDNSGVVPFTFYPTGPPVPFVTMLPLYNFPTESSDTATNNFNVEEGADNSDSSQNFDSSEGYEHPEVSNSSPSNSVTRVASQSSEHKPDILNSDFVSHWQNLQYGRFCQNSRGPPSMIYPSPVMVPPVYLQGRYPWDGPGRPLSGNMNIFSQLMSYGPRLVPVAPLQSVSNRPTNIYQRYVDDMPRYRSGTGTYLPNPV 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00599 1138 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Cca11g00599 1138 Pfam Nucleotidyltransferase domain 78 145 IPR002934 GO:0016779
Cca11g00599 1138 MobiDBLite consensus disorder prediction 776 792 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 509 586 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 400 417 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 976 1025 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 418 432 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 808 882 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 509 543 - -
Cca11g00599 1138 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1137 - -
Cca11g00599 1138 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Cca11g00599 1138 CDD NT_PAP_TUTase 59 166 - -
Cca11g00599 1138 Gene3D - 162 361 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 740 792 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 450 481 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 808 836 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 397 432 - -
Cca11g00599 1138 PANTHER - 1 1137 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 544 564 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 565 584 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 450 486 - -
Cca11g00599 1138 MobiDBLite consensus disorder prediction 740 775 - -
Cca11g00599 1138 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00599 Cca-Chr11 9717600 9725905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00599 - - gmx:100809742 2021.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00599 11 9717600 9725905 Cca11g00599 11 9717600 9725905 ECH
Cca11g00599 11 9717600 9725905 Cca03g03144 03 52873747 52880953 ECH
Cca03g03144 03 52873747 52880953 Cca11g00599 11 9717600 9725905 PCT