Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03144 ATGCTGATAAATGAGGAAAAGGATGAAAATGCAGAGTTTCGTGTCAAAGAGGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAGTGTCTTGTTGAGAATATTGTGGTAGACATTTCATTCAACCAGCTTGGAGGGTTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATTTGATTAACCAAAACCATATATTCAAGCGTAGCATTATACTTATAAAAGCTTGGTGTTACTATGAGAGTCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCACTAGAAACTCTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCTCTTGAGGTATTGTATAGATTTTTGGAGTTTTTTAGCAAGTTTGATTGGGATAATTTCTGTGTAAGCCTATGGGGTCCTGTACCCATTAGTTCACTCCCAGATGTGTCAGCTGAACCTCCTCGGAAAGATGGTGGAGATTTACTGCTCAGCAAAATATTTCTTGATTCCTGCAGCTCAGTTTATGCCGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAAGCATTTGCTTCCAAGCATTTCAATGTTATTGATCCTTTACGTGTCAACAATAACCTTGGGCGTAGTGTCAGCAAAGGAAATTTCTATAGAATACGCAGTGCTTTTTCATTTGGGGCCAAAAGGCTTGCTAGATTGCTTGATTGCCCAAAGGAGGACTTGTTTTTGGAAGTCAATCAGTTCTTCATGAACACTTGGGTCAGACATGGAACTGGGCAGCGACCTGATGCTCCAAGTAATGAATTGTGGCGTTTGAGGTTATCAAGTCATGACCAATTACAGGGGTCTGACAATATCCAAAAAAATAGCAAAAAAATTGATGATACCTATAGTCATGAATTTCAAGTAAAAGGGGTGCATGCTTCACAAAGTGTTCTATCTCAGCACTGTATTTTGTTCTCTGAAAGCTTATCTAAGAGTAATGATGCTTCTACACGATCACATTCTTATGCTTACCAAAATAATGCAAGGAATTATTATCAGGTCAAAAGGGAAGTTAATTGTAATCAAGGTGCTCATGTTGATAAAGGACCGAGAAATGTTAAACAAAATAACCCATTCAATGATGTTCCAGGAAGGCTTTTATTTGCAAGAACATGTTCTAGTCCTGAGTTGACAGACTCGTATGGTGAAGTTCCTACTGATGGAAGAAATACAAGAGCCCCAGAGGGTAGTAAAGGCCCAACTTCTTCTGCAAAGTTGGAGAATAGTCACAGGAAGCCTCTTGATTCTGACATGCCTGCTACTTATGGTGTTAGAATTGACGATTCATCCACTAGGCACATCATATCTCGTCAAGTTAATGATAGTGCGGATAATTCAAACAATGGCTCAAATAGTTATGATGATGATGAATCAGGCCATGGTGTCATGGGTGAAGCATTTGCATCTGTTGCTGGAGTAGCTAGAACACATATGACGCATCAAGAGGAGCAGGACCTTTTGAATATGATGACATCTTCCACAGCTCAAGGTTTCACTGGTCAGGCTCACATTCCAGTGAATTTAGCTCCAGGTCACCTACCACTTCCATTTTCACCTTCGATTCTTGCATCAATGGGATATGCTCAGAGAAACTTGGGTAACACTCCCTTGATTGAGGCTCCTTGGGTTACTAATATGCAATTTCCCCAAGGTTTAGTCTCTTCACCATATTTCCCTGGCATAGGATTGACTTCAAATCCTGAAGATTTAATTGAAACTGGTAACAAAAATTTCAACCCTGTTGAAACAAGTTTAGCAGAAGCTGATAACAATTTCTGGCATGAGCAAGAAAGGGCTTCTGCTAAGGGGGTTGAAGTTGATAATGGAAATTTTGAAATGCTTCCAGAAGATAAGCAACAGTCAACTTCTGGTGGTTATAACTTTATACCACCATCTCATGCTGACAGATCTAGTAATGCTGCTAGACTTCAGCAGACATTTACTGAAGAAAACCAAGGTTCAACCAGAGAGGAGCACATTGGTAGTCCACTGTATCAAGATGGCAGAGGAAATGGTGCTTATTTTGATGATAGAATAGCAAATCCTAGATTTCCCAGTGCACCACCTTCAAATTCCTTCAGGAATAAGACATCTTCTGAAAGCTCTTGGGAGGGATCGTCAGCTAAATCTTCAAAATCAACTAGGGAAAAAAGAGGGAAGAAGAATAATACTTCATCGGTGCCATCTGCTGTTTACGGAAAGGGCAATAATGATTCATATATCTCATCTAATCTAGTGGATGATGAAAACAGACGATGGACTCCTTTGTTAACTACAGCATCTGATATGTCCGAAAGAAGTGCTGGGCCTCTGGCTGTTGCTCCCATGCCTGTTCCAAGACAGCAAGTATCAGGTTTTGAAGTGGCTCCAACAAGCGGATCAGATTCTGTGTTACCCATGGCACCGGTGCTTATAGGTCATGGTTCTCGCCAAAGAACAGTTGATACTTCTGGGGTTGTTCCATTTGCATTCTATCCCACAGGACCACCAATACCATTTGTTACTATGCTTCCATTATATGATGTTCCTACATCAGCAAGCATCTTCAATGCGGAAGAAGATGCAGATAACAGTGACTGTCGTCAGAATTATGATCCATCTGAGGTGTATGACCAGCCTGAAGTGTTGAGCTCTTCCAGTTCTATGAGAAGAGCTTCTATTGACTCGTCAGAGCCCAAACCTGACATTCTTAATGGTGACTTTGTTAGCCATTGGCAAAATTTGCAGTATGGGCGATTTTGTCAAAATTCAAGCCATCCTCATTCAGTTATCTATCCTTCTTCTATTATGGTGCCTCCTGTTTATATGCAGGGTCATTTTCCATGGGATGGTCCTGGAAGACCACAGTCAGCTAATATGAATCTTCTCACTCAGCTCATGAGCTATGGGCCACACCTTGTACCTGTTGCTCCTCTCCATTCAGTTTCTAACAGACCAGCCAATATTTACCAACGTTTTGTAGAGGAAATACCACGGTATCGAAGTGGAACAGGAACCTACCTGCCAAATCCTAAGGTTTCTGTTCGGGATCGACATTCTACAAGTACCAGAAGAGGTAATCACAACTATGACAGAAGTGACCAACATGGTGACAGAGAAGGGAATTGGAATAATAATTCGAAGTTGCGAACAAGTGGGCGTAACCATAACCGCAATCAAACTGAGAAGTCTAGCTCAAGGCCAGAGAAGTTGGCAACAAGTGAGAGCCACGCTGAAAGACCATGGGGTTCACATAGACATGACTCTTTTGTTTCTCACCACAATCAGAATGGTCCTGTCCGGTTAAATTCCTCACAAAACAGTCCAGCAAATGTGGCTTATGGAATGTACCCTCTACCCGGCGTGCCCTCCAGTGGGATCTCATCAAATGGACCAACAATTCCACCTGTTGTAATGTTGTATCCTTATGATCATACCTCACCAGCGGAACAACTCGAGTTTGGAACTCTGGGACCTATGGGTTTGCCAGCTGTCAACGAACTATCACAGCTGAATGAGGGAAGCCAATCTGGTGGTGCATTTGAGGAGCAAAGGTTTAATGATGGTACTGCTCAGCAATCCTCACCAGATCAACCCTCTTCACCGAGGGGGCTTTGA 3639 0.4199 MLINEEKDENAEFRVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHIFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVSAEPPRKDGGDLLLSKIFLDSCSSVYAVFPGGQENQGQAFASKHFNVIDPLRVNNNLGRSVSKGNFYRIRSAFSFGAKRLARLLDCPKEDLFLEVNQFFMNTWVRHGTGQRPDAPSNELWRLRLSSHDQLQGSDNIQKNSKKIDDTYSHEFQVKGVHASQSVLSQHCILFSESLSKSNDASTRSHSYAYQNNARNYYQVKREVNCNQGAHVDKGPRNVKQNNPFNDVPGRLLFARTCSSPELTDSYGEVPTDGRNTRAPEGSKGPTSSAKLENSHRKPLDSDMPATYGVRIDDSSTRHIISRQVNDSADNSNNGSNSYDDDESGHGVMGEAFASVAGVARTHMTHQEEQDLLNMMTSSTAQGFTGQAHIPVNLAPGHLPLPFSPSILASMGYAQRNLGNTPLIEAPWVTNMQFPQGLVSSPYFPGIGLTSNPEDLIETGNKNFNPVETSLAEADNNFWHEQERASAKGVEVDNGNFEMLPEDKQQSTSGGYNFIPPSHADRSSNAARLQQTFTEENQGSTREEHIGSPLYQDGRGNGAYFDDRIANPRFPSAPPSNSFRNKTSSESSWEGSSAKSSKSTREKRGKKNNTSSVPSAVYGKGNNDSYISSNLVDDENRRWTPLLTTASDMSERSAGPLAVAPMPVPRQQVSGFEVAPTSGSDSVLPMAPVLIGHGSRQRTVDTSGVVPFAFYPTGPPIPFVTMLPLYDVPTSASIFNAEEDADNSDCRQNYDPSEVYDQPEVLSSSSSMRRASIDSSEPKPDILNGDFVSHWQNLQYGRFCQNSSHPHSVIYPSSIMVPPVYMQGHFPWDGPGRPQSANMNLLTQLMSYGPHLVPVAPLHSVSNRPANIYQRFVEEIPRYRSGTGTYLPNPKVSVRDRHSTSTRRGNHNYDRSDQHGDREGNWNNNSKLRTSGRNHNRNQTEKSSSRPEKLATSESHAERPWGSHRHDSFVSHHNQNGPVRLNSSQNSPANVAYGMYPLPGVPSSGISSNGPTIPPVVMLYPYDHTSPAEQLEFGTLGPMGLPAVNELSQLNEGSQSGGAFEEQRFNDGTAQQSSPDQPSSPRGL 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03144 1212 SUPERFAMILY Nucleotidyltransferase 18 84 IPR043519 -
Cca03g03144 1212 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1209 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 1174 1212 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 886 901 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 737 752 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 1175 1212 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 628 752 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 1008 1114 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 447 469 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 391 475 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 628 665 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 886 905 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 357 376 - -
Cca03g03144 1212 Gene3D - 42 241 - -
Cca03g03144 1212 PANTHER - 1 1209 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 1062 1099 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 1024 1050 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 699 723 - -
Cca03g03144 1212 MobiDBLite consensus disorder prediction 1100 1114 - -
Cca03g03144 1212 SUPERFAMILY PAP/OAS1 substrate-binding domain 65 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03144 Cca-Chr3 52873747 52880953 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03144 - - gmx:100809742 1715.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03144 03 52873747 52880953 Cca03g03144 03 52873747 52880953 ECH
Cca11g00599 11 9717600 9725905 Cca03g03144 03 52873747 52880953 ECH
Cca03g03144 03 52873747 52880953 Cca11g00599 11 9717600 9725905 PCT