Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00547 ATGGCCTCCACACTTACTCTTCTGACTCTTCCTCTCAAACCAACCCCAAAACTTCATCCACTTCCCCACATCTCATCAAGATTCAATGTTCCAAAAGATCCCCCCATTCCCAACTCAAACAAATTATTGAATCAAACTTGCAATGTTCTCAAAACAACCTCACTTTCCCTCCTACCGATCACACTTCCCTTCTTGTTAGACCAAAAGGACCTTGCACTTGCTGTTGATGGGGAGTTTGGGATACTTGAGGGCAGAACATTTGCTCTCATACACCCCATTGTGATGATTTCTTTGTTCTTGTATACTTTATGGGCAGGGTATTTGGGGTGGCAGTGGAGGAGAGTTAGGACTATTCAGAATGAGATTAATGAGCTCAAGAAACAAGTGAAACCAACCCCGGTCACCCCAGAAGGTAAAGCACTAGAAGTGCCACCATCACAAGTTGAAATCAAAATTCAGCAACTTACTGAGGAGAGGAAAGAGCTGCTGAAAGGGTCTTACAGGGATAGGCACTATAATGCAGGGTCCATACTTTTAGGATTTGGAGTGCTTGAGTCTGTTGGTGGAGGACTCAACACTTGGATTAGGACAGGAAAACTATTTCCAGGTCCACATCTGTTTGCAGGAGCAGCTATTACAGTGTTGTGGGCACTTTCAGCAGCTTTGGTACCATCGATGCAGAAAGGGAGTGAAACAGCCAGAAGTTTTCACATTGCATTGAATACATTAAACGTACTACTATTTGTGTCACAGATTCCCACTGGATTTGACATTGTACTCAAAGTGTTTGAGTTCACAAAATGGCCTTGA 810 0.4346 MASTLTLLTLPLKPTPKLHPLPHISSRFNVPKDPPIPNSNKLLNQTCNVLKTTSLSLLPITLPFLLDQKDLALAVDGEFGILEGRTFALIHPIVMISLFLYTLWAGYLGWQWRRVRTIQNEINELKKQVKPTPVTPEGKALEVPPSQVEIKIQQLTEERKELLKGSYRDRHYNAGSILLGFGVLESVGGGLNTWIRTGKLFPGPHLFAGAAITVLWALSAALVPSMQKGSETARSFHIALNTLNVLLFVSQIPTGFDIVLKVFEFTKWP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00547 269 Pfam Protein of unknown function (DUF4079) 88 262 IPR025067 -
Cca11g00547 269 PANTHER - 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00547 Cca-Chr11 8427242 8429361 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00547 - - var:108319241 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00547 11 8427242 8429361 Cca11g00547 11 8427242 8429361 ECH
Cca03g03177 03 53198809 53201213 Cca11g00547 11 8427242 8429361 PCT