Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03177 ATGGCGGTCACACTCACTCTCCTAAAGCTTCCAATTCTTCCTAACAAGCCACGCCCATCAACCTCAAAACTTGTTCCACTTCCTTCCATCTTAAACATACCAAAACATTCTCCTAACCCACAAAAGCTCCCCTTCTTAGATCAAAACATCCATTCTCTCAAGCCTGCTTTTCTTTCCCTCTCAGCAATCACATTTCCATTCTTACTAGATCCCAAGGATGCACTTGCTGCTGGAGGAGAGTTTGGGATATTGGAAGGAAGATCATTTGCTCTCATACACCCCATTGTCATGGGTGCTTTCTTCTTCTATACTTTGTGGGCAGGGTATTTGGGGTGGCAATGGCGGCGAGTTAGGACTATCCAGAATGATATCAATGAACTCAAGAAACAAGTCAAACCTACCCCAGTCACCCCAGATGGGAATCCAGTGGAAGCACCACCATCACCGGTTGAACTCCAAATACAGCAACTCACTGAGGAAAGGAAAGATCTGATCAAAGGTTCCTATAAGGATAGACACTTCAATGCAGGATCCATACTTTTAGGATTTGGGGTGCTTGAGTCAATTGGTGGGGGAGTGAACACATGGCTTAGAACAGGAAAGCTATTTCCCGGTCCACATTTATTTGCAGGAGCAGGTATTACCGTTTTATGGGCACTGGCAGCAGCCCTAGTACCATCGATGCAAAAAGGAAATGAAACAGCCAGAAATCTTCACATCGCGCTGAATGCAGTGAACGTTCTGCTCTTTGTGTGGCAGATTCCCACTGGAATTGACATTGTGTTCAAGGTGTTTGAGTTCACAAAATGGCCTTGA 816 0.4522 MAVTLTLLKLPILPNKPRPSTSKLVPLPSILNIPKHSPNPQKLPFLDQNIHSLKPAFLSLSAITFPFLLDPKDALAAGGEFGILEGRSFALIHPIVMGAFFFYTLWAGYLGWQWRRVRTIQNDINELKKQVKPTPVTPDGNPVEAPPSPVELQIQQLTEERKDLIKGSYKDRHFNAGSILLGFGVLESIGGGVNTWLRTGKLFPGPHLFAGAGITVLWALAAALVPSMQKGNETARNLHIALNAVNVLLFVWQIPTGIDIVFKVFEFTKWP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03177 271 PANTHER - 1 271 - -
Cca03g03177 271 Pfam Protein of unknown function (DUF4079) 90 264 IPR025067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03177 Cca-Chr3 53198809 53201213 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03177 - - gmx:100798854 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03177 03 53198809 53201213 Cca03g03177 03 53198809 53201213 ECH
Cca03g03177 03 53198809 53201213 Cca11g00547 11 8427242 8429361 PCT