Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00545 ATGGCCAACCCAATTTCTATTCGTCCATGGTCTCGTTTGGCCTCCTTGCGTTCTCCTCAGTCTGAGATTTCACAACCTTCTCTCAAACCAACAAACACTACTTCTCATGACAACAACCAAAGTGCCACTGCCACCAAATCTCTACCAACTACACCACATGATGTTCACAGCCCAATTCAGTCACCAAAGCTCAAACTCACTACCCGAATGACCTTTTCACCTTCTAAATTGAAGGATAACCCTCAGATTGAGGCAAAGATAGAGGTAGAAGAAGTGACCATTAAAAAGCCTAATGACAATGGCCAAAATGAAAAACAGGTGACAAACAAAGAAAACGAAACCAAAGGGAAATGTTTTCACACACCAAAATTTTCGGGGTCTGAGGGCATAAGGGCCATAACAATTTCAGGGGAAAACACAGGTGCATACATGCAAATAACCAAATCCAAAAAGAAACGCATGTACGTGAACAGCAATGTGCAGTGTGTGAACAACTCAATGGTGTTCAACGCTAGTTTAACCCACCATGATCCAGGGGTGTACCTTGCTATCCCAAAAAAGCCATTTGGTGAATGA 576 0.4271 MANPISIRPWSRLASLRSPQSEISQPSLKPTNTTSHDNNQSATATKSLPTTPHDVHSPIQSPKLKLTTRMTFSPSKLKDNPQIEAKIEVEEVTIKKPNDNGQNEKQVTNKENETKGKCFHTPKFSGSEGIRAITISGENTGAYMQITKSKKKRMYVNSNVQCVNNSMVFNASLTHHDPGVYLAIPKKPFGE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00545 191 PANTHER EXTENSIN-RELATED 19 152 - -
Cca11g00545 191 PANTHER EXTENSIN-RELATED 154 189 - -
Cca11g00545 191 MobiDBLite consensus disorder prediction 13 61 - -
Cca11g00545 191 PANTHER OS01G0106600 PROTEIN 19 152 - -
Cca11g00545 191 PANTHER OS01G0106600 PROTEIN 154 189 - -
Cca11g00545 191 MobiDBLite consensus disorder prediction 97 123 - -
Cca11g00545 191 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00545 Cca-Chr11 8398551 8399126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00545 - - ccaj:109806199 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03179 03 53212276 53214857 Cca11g00545 11 8398551 8399126 PCT