Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03179 ATGCCTCACGTCCACCATGTCCATATACATGAGTGCTCATTATTAATAATTCATATTACCTTACCCTCTATCATTCACGGTTTGAACAGTTCAATGGCTAACCCACCCCCAGTTCGTCCATGGTTCCGCTTAGCCTCCATTCGCTCCAcccctgctcctgctcctgcccctgcccctgcccctgcccctgcccctACCCAAGAAACACGCCCTACCCTACCCGCATTTAGAACAGCTTCAGCACCTTCTTCACCACAGACTCATCCAACTCAAACCCCTCAAGAACCTTCTTCTCAACCTCACAAAGTTTCCTCTTCTCTCCCAACTTCTCCACTTCAAAAGCCTACACTCACCACTTCCCCACGTGTGCCAAGTCCCAATAACCACTCTCCAAAAACAGTAAAACAAAGTGATCATAATCGCAGCCCAAAGCAGTCACCCAACAACAAAcacacctctcctccaccctctcccctcaccctcccaccTTCCCAGTTGCGGGCCGAGCCCAAGATACCCGACCAGGCCGAGCCCAAAACCGTCCTAGTCCAGAAAACCATCGACAGGCCCAAGCCCACCTCGCACAATGGCGGCCACGTTAAACACCACCACGATGAGTCCAAGGAGAAAAGCCTTCACAGAAAGGTTTCGGACTCCGAGGACTCCGGCATGAGAGTCATCACCATTGCCGGAGAAAACCGTGGTGCCTTCATGGAACTCATCCAATCCCCCAAGAAACACGACCCCAAGTACCTTCACAAGAAGGGCACCATGAGTTCCAACATCAACGTCGACGGGGTTGAATCGGAGGGTTCCAGCGCTGAGGAAGGGAATGTGAACAAGAAGGATAAGAATCAGAAGGGTAGAAGCGCGTCTTCGTTTCCCATGTCTGCCTACATGAACAGCAACGTTCAGTGTGTCAACAACTCTCTCCTCTACCACACTTCTTGCTCCCACCACGACCCCGGAGTGCGCCTTTCTCTTTCTAAGAAACCCTTCGGTGAAGGCTTCCATATCAAGGAACACGTTGATGCCCACCACGATTGA 1047 0.4651 MPHVHHVHIHECSLLIIHITLPSIIHGLNSSMANPPPVRPWFRLASIRSTPAPAPAPAPAPAPAPTQETRPTLPAFRTASAPSSPQTHPTQTPQEPSSQPHKVSSSLPTSPLQKPTLTTSPRVPSPNNHSPKTVKQSDHNRSPKQSPNNKHTSPPPSPLTLPPSQLRAEPKIPDQAEPKTVLVQKTIDRPKPTSHNGGHVKHHHDESKEKSLHRKVSDSEDSGMRVITIAGENRGAFMELIQSPKKHDPKYLHKKGTMSSNINVDGVESEGSSAEEGNVNKKDKNQKGRSASSFPMSAYMNSNVQCVNNSLLYHTSCSHHDPGVRLSLSKKPFGEGFHIKEHVDAHHD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03179 348 MobiDBLite consensus disorder prediction 52 68 - -
Cca03g03179 348 MobiDBLite consensus disorder prediction 192 221 - -
Cca03g03179 348 MobiDBLite consensus disorder prediction 149 163 - -
Cca03g03179 348 MobiDBLite consensus disorder prediction 71 133 - -
Cca03g03179 348 MobiDBLite consensus disorder prediction 50 221 - -
Cca03g03179 348 PANTHER EXTENSIN-RELATED 32 347 - -
Cca03g03179 348 PANTHER OS01G0106600 PROTEIN 32 347 - -
Cca03g03179 348 MobiDBLite consensus disorder prediction 255 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03179 Cca-Chr3 53212276 53214857 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03179 - - gmx:102670397 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03179 03 53212276 53214857 Cca03g03179 03 53212276 53214857 ECH
Cca03g03179 03 53212276 53214857 Cca11g00545 11 8398551 8399126 PCT