Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00514 ATGGAAGAAGAAATGCAGATACAACAACAAGAAGACCACGaccctaaccctaattaccgcaaccctaaccctCGTCATCACCAGCAATTCCGTTTCCCCGGCAAAGTCCCACCCCACCGCCACCACCAAGTTCACAACATGGACAAAAGCATCCCCTCTCGCTTCAAACCCAATGCTCCCAAACGCGAACACTGCATTTGCATCACCGTCTTCCTCATTCTACTCGGCGTCATAATCCTCGTCCTCTGGCTGGCCTACCACCCTTCCAAGCCGCGCTTCGCGGTGGCCAGCGCCGCCGTCTACGGCCTGAACGCCACCTCGCCGCCGCTGATCTCCATCGCCATGCAGTTCAACGTCCTCATAAGGAACCCTAACAGGCGCGTCTCCATCTACTTCGACAGGCTCTCCGCCTACGTGTCCTACAGAAACCAACCCATCACGCCGCGCGTGGTGCTCCCGCCGCTCTTCCTTGAGAAGCACGCCACCGTGTCTCTGGCGCCGGAGATCGGCGGCGTCCCCGTGCCCGTGTCGCCGGAGCTCTCCAACGGGTTGGCGATGGACGAGGCTTATGGGGTGGTGGCTGTGAAGCTGGTGCTTGTTGGAAGGTTGAGATGGAAAGCTGGTGACATAAACTCTGCACACTATGGCTTGTATGTCAAGTGTGACGTTATGATGGGTTTGAAGAAAGGTTTTGTGGGTCAGGTTCCTCTTCTTGGAGCCCCCGTTTGTGACGTCGATTCATGA 744 0.547 MEEEMQIQQQEDHDPNPNYRNPNPRHHQQFRFPGKVPPHRHHQVHNMDKSIPSRFKPNAPKREHCICITVFLILLGVIILVLWLAYHPSKPRFAVASAAVYGLNATSPPLISIAMQFNVLIRNPNRRVSIYFDRLSAYVSYRNQPITPRVVLPPLFLEKHATVSLAPEIGGVPVPVSPELSNGLAMDEAYGVVAVKLVLVGRLRWKAGDINSAHYGLYVKCDVMMGLKKGFVGQVPLLGAPVCDVDS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00514 247 MobiDBLite consensus disorder prediction 1 56 - -
Cca11g00514 247 MobiDBLite consensus disorder prediction 41 56 - -
Cca11g00514 247 Pfam Late embryogenesis abundant protein 119 213 IPR004864 -
Cca11g00514 247 PANTHER OS05G0367900 PROTEIN 35 246 IPR044839 GO:0098542
Cca11g00514 247 MobiDBLite consensus disorder prediction 11 25 - -
Cca11g00514 247 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 35 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00514 Cca-Chr11 7304433 7305707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00514 28 225 EF-hand Containing Proteins AT5G21130 18.719 3.05e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00514 - - gmx:100780333 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00514 11 7304433 7305707 Cca11g00514 11 7304433 7305707 ECH
Cca11g00514 11 7304433 7305707 Cca03g03204 03 53415720 53417171 ECH