Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g03204 ATGTCGAAGGAGCAAGGATCGAGTGGACCTCGACGTGCAGTGTGCACAGGCATCACCATCTTCCTCCTTCTAGCTGGCATCACTCTCCTCGTCCTCTGGCTCGTCTACCGCCCCCACAAGCCCCGCTTCACGGTGGTCGGCGCCGCCATCTACGGCCTCAACGCCACCACCCCGCCGCTCATGTCCACCACCATGCAGTTCTCCGTCCTCATAAGGAACCCCAACAGGCGCGTCTCCCTTTACTACGACAGGTTCTCCGCCTTCGTCTCCTACCGGAACCAGGCCATCACGCCGCAGGTCCTGCTGCCGCCGCTCCACCAGGGCAAGCACAGCTCCGTCTCGGTGGCTCCGGTGATCGGAGGCACGCCGGTGCCCGTGTCCCTGGAGGTTTCGAACGGGTTGACGGTGGACGAGGCTTACGGGGTGGTGGGTCTCAAGCTTATATTTCAGGGAAGGCTGAGGTGGAAGGCTGGGGCCATAAAAACTGCGCATTATGGACTCTACGTGAAGTGCGACATAGTTATGGGTTTGAAGAAAGGTTTGGTGGGTCAAGTTCCTCTCCTCGGAGTTACACCTTGCGACGTCGATGTCTGA 594 0.5993 MSKEQGSSGPRRAVCTGITIFLLLAGITLLVLWLVYRPHKPRFTVVGAAIYGLNATTPPLMSTTMQFSVLIRNPNRRVSLYYDRFSAFVSYRNQAITPQVLLPPLHQGKHSSVSVAPVIGGTPVPVSLEVSNGLTVDEAYGVVGLKLIFQGRLRWKAGAIKTAHYGLYVKCDIVMGLKKGLVGQVPLLGVTPCDVDV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g03204 197 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 9 196 - -
Cca03g03204 197 Pfam Late embryogenesis abundant protein 69 170 IPR004864 -
Cca03g03204 197 PANTHER OS05G0367900 PROTEIN 9 196 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g03204 Cca-Chr3 53415720 53417171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g03204 3 175 EF-hand Containing Proteins AT5G21130 23.295 5.17e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g03204 - - gmx:100804161 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03204 03 53415720 53417171 Cca03g03204 03 53415720 53417171 ECH
Cca11g00514 11 7304433 7305707 Cca03g03204 03 53415720 53417171 ECH