Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca11g00354 | ATGGAATTCAGATCCAAATCATGCAGGGGTGAGATTCTGCAGATTGAAAGCTACAATGGAGGAAGGGTGGCACCAACAAGCATGCAAGATCTGAGGTCCTACAGTGCAAATTATGCTGCTTCATCTGCTTATCCATACAAGATAGGTAAGGAAGTGAAGTTGGAAAAAGGAAAAGGCACAGTTAGCAGCAAAGCATCAAAAAGTTGGAGCTTCAATGACCCTGAGTTGCAGAGGAAGAAGAGAGTAGCTGGCTATAAAATATATGCTGTGGAAGGGAAAATGAAAGGATCACTGAGGAAGAGTTTGAGGTGGATTAAGAACACATACACACAAGCTGTCCATGGATGGTGGTGA | 354 | 0.4322 | MEFRSKSCRGEILQIESYNGGRVAPTSMQDLRSYSANYAASSAYPYKIGKEVKLEKGKGTVSSKASKSWSFNDPELQRKKRVAGYKIYAVEGKMKGSLRKSLRWIKNTYTQAVHGWW | 117 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca11g00354 | 117 | Pfam | Domain of unknown function (DUF3511) | 71 | 115 | IPR021899 | - | |
| Cca11g00354 | 117 | PANTHER | DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED | 1 | 116 | - | - | |
| Cca11g00354 | 117 | PANTHER | OS06G0564000 PROTEIN | 1 | 116 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca11g00354 | Cca-Chr11 | 4607653 | 4608006 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca11g00354 | - | - | gmx:100305758 | 194.512 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca10g00288 | 10 | 3111359 | 3111994 | Cca11g00354 | 11 | 4607653 | 4608006 | PCT |