Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00288 ATGATGGAGTTGAGATCCaagtcatgcagagatgaaggcaacgtggccccaacaaccatgcaagatctcaggtcttacagtgttaataatgcttcttatgcttatgcttatgcaCATCACAACCATGTCAAAGTGAAGAAAGGGAAAAACACAACAAAGAGTTGGAGTTTCAGTGACCCTGAGTTGCAGAGAAAAAAGAGAGTTGCTGGCTACAAAATATATGCTGCTGAGGGCAAAATGAAAGGCTCTCTTAGGAAGAGTTTCAGCTGGATCAAGAACACTTGCACTCAAGCTGTCTATGGATGGTGGTGA 312 0.2981 MMELRSKSCRDEGNVAPTTMQDLRSYSVNNASYAYAYAHHNHVKVKKGKNTTKSWSFSDPELQRKKRVAGYKIYAAEGKMKGSLRKSFSWIKNTCTQAVYGWW 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00288 103 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 2 102 - -
Cca10g00288 103 Pfam Domain of unknown function (DUF3511) 57 101 IPR021899 -
Cca10g00288 103 PANTHER OS06G0564000 PROTEIN 2 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00288 Cca-Chr10 3111359 3111994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00288 - - gmx:100305940 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00288 10 3111359 3111994 Cca11g00354 11 4607653 4608006 PCT